##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename SoilN_1_CGATGT_L005_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 22858326 Filtered Sequences 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.255379680909265 34.0 33.0 34.0 31.0 34.0 2 33.405858504249174 34.0 34.0 34.0 31.0 34.0 3 33.41367871820535 34.0 34.0 34.0 31.0 34.0 4 36.65877457518105 37.0 37.0 37.0 35.0 37.0 5 36.60311861857251 37.0 37.0 37.0 35.0 37.0 6 36.60830587506714 37.0 37.0 37.0 35.0 37.0 7 36.567578351975556 37.0 37.0 37.0 35.0 37.0 8 36.56592569377128 37.0 37.0 37.0 35.0 37.0 9 38.44141487001279 39.0 39.0 39.0 37.0 39.0 10 38.43003359038628 39.0 39.0 39.0 37.0 39.0 11 38.43872696539545 39.0 39.0 39.0 37.0 39.0 12 38.429351650685184 39.0 39.0 39.0 37.0 39.0 13 38.40894009473835 39.0 39.0 39.0 37.0 39.0 14 40.06560922265261 41.0 40.0 41.0 38.0 41.0 15 40.03742522527678 41.0 40.0 41.0 38.0 41.0 16 40.02259133061625 41.0 40.0 41.0 38.0 41.0 17 40.01447962549838 41.0 40.0 41.0 38.0 41.0 18 39.99392405200626 41.0 40.0 41.0 38.0 41.0 19 40.00479155822697 41.0 40.0 41.0 38.0 41.0 20 39.967602133244576 41.0 40.0 41.0 38.0 41.0 21 39.95132036352968 41.0 40.0 41.0 38.0 41.0 22 39.92379078852931 41.0 40.0 41.0 38.0 41.0 23 39.88965001199126 41.0 40.0 41.0 38.0 41.0 24 39.85716272486445 41.0 40.0 41.0 38.0 41.0 25 39.82946559603708 41.0 40.0 41.0 38.0 41.0 26 39.71570914685529 41.0 40.0 41.0 38.0 41.0 27 39.64902272371126 41.0 40.0 41.0 38.0 41.0 28 39.592581101520736 41.0 40.0 41.0 38.0 41.0 29 39.28937254635357 41.0 40.0 41.0 37.0 41.0 30 39.309920376496514 41.0 39.0 41.0 37.0 41.0 31 39.581015293945846 41.0 40.0 41.0 38.0 41.0 32 39.609315572802664 41.0 40.0 41.0 38.0 41.0 33 39.63726359489317 41.0 40.0 41.0 38.0 41.0 34 39.7265666785923 41.0 40.0 41.0 38.0 41.0 35 39.770785927193444 41.0 40.0 41.0 38.0 41.0 36 39.76912399446923 41.0 40.0 41.0 38.0 41.0 37 39.74150863015953 41.0 40.0 41.0 38.0 41.0 38 39.70638287335652 41.0 40.0 41.0 38.0 41.0 39 39.698573377595544 41.0 40.0 41.0 38.0 41.0 40 39.66456598790305 41.0 40.0 41.0 38.0 41.0 41 39.632484592266294 41.0 40.0 41.0 38.0 41.0 42 39.609152918722046 41.0 40.0 41.0 37.0 41.0 43 39.57318926154085 41.0 40.0 41.0 37.0 41.0 44 39.53139250004572 41.0 40.0 41.0 37.0 41.0 45 39.47222666261737 41.0 40.0 41.0 37.0 41.0 46 39.44866238236343 41.0 40.0 41.0 37.0 41.0 47 39.398945749570636 41.0 40.0 41.0 37.0 41.0 48 39.36422452807786 41.0 39.0 41.0 37.0 41.0 49 39.32299263734361 41.0 39.0 41.0 37.0 41.0 50 39.26310124372187 41.0 39.0 41.0 36.0 41.0 51 38.35295638009538 40.0 38.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 12.0 11 17.0 12 14.0 13 21.0 14 14.0 15 25.0 16 45.0 17 84.0 18 205.0 19 516.0 20 1456.0 21 2453.0 22 3773.0 23 6315.0 24 10865.0 25 16305.0 26 22874.0 27 33065.0 28 45723.0 29 61866.0 30 82500.0 31 108557.0 32 143275.0 33 190264.0 34 261020.0 35 375112.0 36 589113.0 37 1113020.0 38 3092781.0 39 1.667468E7 40 22350.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 15.191713784144115 31.31489636212063 32.44241570445733 21.05097414927792 2 18.540631540559882 32.07980321918586 32.948873858916876 16.430691381337372 3 16.55564803826842 31.692233280774808 33.442737670291336 18.309381010665433 4 17.167425121157166 30.357008645339995 33.24226804710021 19.233298186402624 5 19.07257464395668 30.494440666096374 32.557287470983205 17.875697218963744 6 19.037496446590183 30.725640189049713 31.067826226644947 19.169037137715158 7 19.570475108282206 30.97820461568358 31.257372040279762 18.193948235754448 8 18.679963703378803 31.11311388244266 31.349089167771954 18.85783324640658 9 18.652686990289666 30.139547401677618 32.090604535082754 19.117161072949962 10 18.755695408316427 30.75964092908641 31.203999802960197 19.280663859636967 11 18.979237587214392 30.510606944708023 31.328225872708266 19.181929595369322 12 18.635546627517694 30.652992699465393 31.238980492272265 19.472480180744643 13 18.56544963091348 31.089525103456833 31.23681497936463 19.108210286265056 14 18.708443479194408 30.94108028733163 31.180695384255174 19.169780849218792 15 18.602725143047458 31.0359775736829 31.2371996843338 19.124097598935844 16 18.58295309989017 30.730898666857758 31.297773074021258 19.38837515923082 17 19.05863056578621 30.67178702053117 31.18003530968773 19.089547103994885 18 18.76599362525497 30.550776115451324 31.363534670036643 19.319695589257062 19 18.775357209136203 30.57094751232156 31.1344463957272 19.519248882815035 20 18.93779547958722 30.556608667584968 31.265540936814823 19.24005491601299 21 19.086408198062387 30.48960470496641 31.0359281209214 19.388058976049802 22 18.834602434099352 30.739143412651966 31.022655173429044 19.403598979819638 23 18.99817993994847 30.750042096790725 30.96272002709594 19.28905793616486 24 18.926687664722696 30.467354182815736 30.941079181781056 19.66487897068051 25 18.89981430071315 30.49318172959109 31.161151430950223 19.445852538745537 26 19.066505076143134 30.53636056135991 30.866407643557036 19.530726718939924 27 18.99920994523046 30.45148739634911 30.849812515273374 19.699490143147063 28 18.950840441720686 30.703498303811948 30.868936155636767 19.4767250988306 29 19.360958172218755 30.497834294779302 30.796055401185384 19.34515213181656 30 19.03491764285436 30.462477997728715 30.99243765676413 19.510166702652796 31 18.983669809502622 30.4912794888336 30.786745881795508 19.738304819868272 32 19.163487581428303 30.747505620606358 30.750793574628588 19.33821322333675 33 19.044301049076267 30.48658558000708 30.73674292088543 19.732370450031222 34 18.997780111411824 30.507839875758343 30.761290792279457 19.733089220550383 35 19.38300050284844 30.554080006537816 30.706386997653578 19.356532492960167 36 19.079956926445472 30.694147571117963 30.738406917322315 19.487488585114246 37 19.0260768928027 30.508856611177542 30.97818519570994 19.48688130030982 38 19.400769998319547 30.535264726899275 30.72183831487803 19.34212695990315 39 19.08994418711688 30.474420444219273 30.94447893465076 19.491156434013092 40 19.034727016789546 30.75590083100842 30.717317250102944 19.492054902099085 41 19.16407014694384 30.540917664983102 30.917905637929998 19.377106550143058 42 19.065555943724753 30.497561206103185 30.711727058088513 19.72515579208355 43 19.01923103511461 30.53780008677102 30.96384528995926 19.479123588155108 44 19.160929984882678 30.563891341534543 30.6867808506452 19.58839782293758 45 19.30694464070642 30.475549452111906 30.721741447219042 19.49576445996263 46 19.03296155927206 30.52797949048422 30.94937457125628 19.489684378987445 47 19.160523389089416 30.80681238120681 30.707430330057722 19.32523389964605 48 19.07157194756065 30.502578626517035 30.941614981401354 19.48423444452096 49 19.258008097585517 30.54824725309252 30.70553158805761 19.488213061264357 50 19.16343315294095 30.566258329307168 30.689049657432715 19.581258860319164 51 19.082921739650967 30.492467959229746 30.67882556550856 19.745784735610723 >>END_MODULE >>Per base GC content pass #Base %GC 1 36.24268793342203 2 34.971322921897254 3 34.865029048933856 4 36.40072330755979 5 36.94827186292042 6 38.20653358430534 7 37.76442334403665 8 37.53779694978539 9 37.76984806323963 10 38.03635926795339 11 38.16116718258371 12 38.10802680826234 13 37.67365991717854 14 37.878224328413204 15 37.7268227419833 16 37.97132825912099 17 38.1481776697811 18 38.08568921451204 19 38.29460609195124 20 38.17785039560021 21 38.474467174112185 22 38.238201413918986 23 38.28723787611333 24 38.591566635403204 25 38.34566683945869 26 38.59723179508306 27 38.69870008837752 28 38.427565540551285 29 38.70611030403531 30 38.545084345507156 31 38.72197462937089 32 38.50170080476506 33 38.77667149910749 34 38.730869331962204 35 38.73953299580861 36 38.56744551155972 37 38.51295819311252 38 38.7428969582227 39 38.58110062112997 40 38.52678191888863 41 38.54117669708689 42 38.7907117358083 43 38.49835462326972 44 38.74932780782026 45 38.802709100669055 46 38.5226459382595 47 38.48575728873547 48 38.55580639208161 49 38.74622115884987 50 38.74469201326012 51 38.82870647526169 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 2624.0 1 3698.5 2 4773.0 3 5206.5 4 5640.0 5 5955.0 6 6270.0 7 7352.0 8 8434.0 9 10674.0 10 12914.0 11 17268.5 12 21623.0 13 31624.5 14 41626.0 15 55520.5 16 69415.0 17 90478.5 18 111542.0 19 143863.5 20 176185.0 21 222217.0 22 268249.0 23 342354.0 24 416459.0 25 517761.0 26 750204.0 27 881345.0 28 1040154.5 29 1198964.0 30 1370432.5 31 1541901.0 32 1700438.0 33 1858975.0 34 1987651.0 35 2116327.0 36 2170460.0 37 2224593.0 38 2206231.5 39 2187870.0 40 2106789.0 41 2025708.0 42 1900680.0 43 1775652.0 44 1631078.0 45 1486504.0 46 1327742.0 47 1168980.0 48 1029678.5 49 890377.0 50 749566.5 51 608756.0 52 536729.5 53 464703.0 54 365346.0 55 265989.0 56 217176.0 57 168363.0 58 131494.0 59 94625.0 60 74064.0 61 53503.0 62 43762.0 63 34021.0 64 27533.5 65 21046.0 66 16792.0 67 12538.0 68 9073.5 69 5609.0 70 4001.0 71 2393.0 72 1878.5 73 1364.0 74 1163.0 75 865.5 76 769.0 77 678.5 78 588.0 79 508.0 80 428.0 81 359.0 82 290.0 83 240.5 84 191.0 85 143.5 86 96.0 87 72.0 88 48.0 89 36.0 90 24.0 91 15.5 92 7.0 93 3.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04657821399519808 2 0.0 3 0.0 4 0.0 5 5.2497282609408934E-5 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 1.3124320652352233E-5 16 0.0 17 4.3747735507840776E-5 18 0.0 19 0.0018724030797355852 20 6.474664855160435E-4 21 0.0019117760416926418 22 6.562160326176116E-5 23 0.0012643095561765984 24 0.004252279891362123 25 0.0017630337409659832 26 0.11430845810843715 27 0.10703320969348323 28 0.12514039742017855 29 0.747198198153268 30 0.11136423550875947 31 0.006916516983789626 32 0.07600731567132256 33 0.0013649293478446322 34 0.009729496376943788 35 0.002379876811626538 36 0.019231504529246806 37 0.024848713768453563 38 0.0060940595562422204 39 0.006982138587051388 40 0.017695959012921595 41 0.017569090579948855 42 0.007616480751915079 43 0.012118122735671895 44 0.03376450226495151 45 0.002432374094235947 46 0.016466647645151267 47 0.026734241168841495 48 0.010324465579850424 49 0.02660737273586876 50 0.025089326313746687 51 0.0240131320202538 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2.2858326E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 58.651659682793934 #Duplication Level Relative count 1 100.0 2 67.2673399741745 3 30.28846153846154 4 10.400525733259546 5 3.160164176351227 6 1.187511529238148 7 0.5314978786201808 8 0.38622947795609663 9 0.2559490868843387 10++ 17.107083563918096 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGCC 49567 0.2168444005917144 TruSeq Adapter, Index 2 (100% over 51bp) >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position GGAAG 1197055 1.7740933 5.4495597 5 CACCG 562295 1.2596588 6.693751 31 >>END_MODULE