##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename DGY1181_1_GGCTAC_L006_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14760280 Filtered Sequences 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.301436964610424 34.0 33.0 34.0 31.0 34.0 2 33.443774372843876 34.0 34.0 34.0 31.0 34.0 3 33.46339581633953 34.0 34.0 34.0 31.0 34.0 4 36.672900514082386 37.0 37.0 37.0 35.0 37.0 5 36.624252114458535 37.0 37.0 37.0 35.0 37.0 6 36.62288452522581 37.0 37.0 37.0 35.0 37.0 7 36.61464342139851 37.0 37.0 37.0 35.0 37.0 8 36.60245828669917 37.0 37.0 37.0 35.0 37.0 9 38.46339452910107 39.0 39.0 39.0 37.0 39.0 10 38.470747573894265 39.0 39.0 39.0 37.0 39.0 11 38.45463114520863 39.0 39.0 39.0 37.0 39.0 12 38.44900584541757 39.0 39.0 39.0 37.0 39.0 13 38.45112816288038 39.0 39.0 39.0 37.0 39.0 14 40.08834635928316 41.0 40.0 41.0 38.0 41.0 15 40.072240635001506 41.0 40.0 41.0 38.0 41.0 16 40.047717116477465 41.0 40.0 41.0 38.0 41.0 17 40.035664567338834 41.0 40.0 41.0 38.0 41.0 18 39.999561051687365 41.0 40.0 41.0 38.0 41.0 19 40.041754221464636 41.0 40.0 41.0 38.0 41.0 20 40.0156845263098 41.0 40.0 41.0 38.0 41.0 21 39.98125204941912 41.0 40.0 41.0 38.0 41.0 22 39.95802383152623 41.0 40.0 41.0 38.0 41.0 23 39.91563723723398 41.0 40.0 41.0 38.0 41.0 24 39.873403282322556 41.0 40.0 41.0 38.0 41.0 25 39.83570033901796 41.0 40.0 41.0 38.0 41.0 26 39.761344838986794 41.0 40.0 41.0 38.0 41.0 27 39.69080505247868 41.0 40.0 41.0 38.0 41.0 28 39.641801713788624 41.0 40.0 41.0 38.0 41.0 29 39.37115989669573 41.0 40.0 41.0 37.0 41.0 30 39.3850376144626 41.0 40.0 41.0 37.0 41.0 31 39.62814553653454 41.0 40.0 41.0 38.0 41.0 32 39.63668019847862 41.0 40.0 41.0 38.0 41.0 33 39.66533256821686 41.0 40.0 41.0 38.0 41.0 34 39.755376998268325 41.0 40.0 41.0 38.0 41.0 35 39.789070261539756 41.0 40.0 41.0 38.0 41.0 36 39.7764846601826 41.0 40.0 41.0 38.0 41.0 37 39.767024948036216 41.0 40.0 41.0 38.0 41.0 38 39.732870921147835 41.0 40.0 41.0 38.0 41.0 39 39.70290990414816 41.0 40.0 41.0 38.0 41.0 40 39.63890014281572 41.0 40.0 41.0 38.0 41.0 41 39.630984439319576 41.0 40.0 41.0 38.0 41.0 42 39.613278271143905 41.0 40.0 41.0 38.0 41.0 43 39.574767687333846 41.0 40.0 41.0 37.0 41.0 44 39.52592715043346 41.0 40.0 41.0 37.0 41.0 45 39.446208405260606 41.0 40.0 41.0 37.0 41.0 46 39.41703273921633 41.0 40.0 41.0 37.0 41.0 47 39.386955599758274 41.0 40.0 41.0 37.0 41.0 48 39.34138844249567 41.0 39.0 41.0 37.0 41.0 49 39.273956862606944 41.0 39.0 41.0 36.0 41.0 50 39.22475948965738 41.0 39.0 41.0 36.0 41.0 51 38.32757623839114 40.0 38.0 41.0 34.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 4.0 9 23.0 10 73.0 11 129.0 12 202.0 13 161.0 14 189.0 15 234.0 16 288.0 17 347.0 18 485.0 19 713.0 20 1134.0 21 1898.0 22 3106.0 23 4978.0 24 7514.0 25 11112.0 26 15580.0 27 21474.0 28 29264.0 29 38797.0 30 50982.0 31 66122.0 32 85438.0 33 113792.0 34 158204.0 35 227172.0 36 361713.0 37 702828.0 38 2016281.0 39 1.0822711E7 40 17331.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 16.148773297000435 31.05842657058746 31.729508420057073 21.063291712355035 2 18.712443124385175 31.854233117528935 32.93604863864371 16.49727511944218 3 16.92961786632774 31.404790424029898 33.392943765294426 18.272647944347938 4 17.669603828653656 30.497016316763638 32.8647085285645 18.968671326018203 5 19.24934350838873 30.731788285859075 32.19332560086936 17.825542604882834 6 19.178789291260056 30.907516659575563 31.12226868324991 18.791425365914467 7 19.530395087356066 31.153921199326838 31.21290382025273 18.10277989306436 8 18.660987460942476 31.199333616977455 31.47128645256052 18.66839246951955 9 18.753207933724838 30.416733286902414 32.025720379288195 18.804338400084553 10 18.816580715270984 30.914670995401174 31.27444736820711 18.99430092112074 11 19.007478177920746 30.80522862709921 31.306723178693087 18.880570016286953 12 18.752957260973368 30.887395090066043 31.250992528597017 19.108655120363572 13 18.67429344158783 31.20520748928882 31.216101591568723 18.904397477554628 14 18.79404049245678 31.11261439484888 31.182125271336314 18.911219841358022 15 18.71157593216389 31.170899197034203 31.260768765904167 18.85675610489774 16 18.71020739443967 30.930856325218762 31.239664830206472 19.11927145013509 17 19.066908920525456 30.868864629477745 31.193282726323375 18.870943723673424 18 18.90663998243936 30.756056118176623 31.303057936570312 19.034245962813714 19 18.84782651408238 30.724468205472522 31.152539341311243 19.275165939133856 20 18.952350497416038 30.781082743687787 31.28427103008886 18.982295728807312 21 19.11714659450862 30.677610429339158 31.083916114712217 19.121326861440004 22 18.886761556529795 30.883601722732713 31.044716661687083 19.184920059050413 23 19.015061847002094 30.90157664631184 31.05481710130415 19.02854440538191 24 18.996097337410852 30.679292850927613 31.005325557730856 19.31928425393068 25 18.953297799615033 30.675549418720855 31.18360886983399 19.187543911830126 26 19.075500360989686 30.675440140683964 30.98492668936971 19.26413280895664 27 19.08243680756683 30.615917997353282 30.930662580967947 19.37098261411194 28 19.030938344093236 30.831112244204185 30.914774642633375 19.223174769069207 29 19.320112503391325 30.64817604626654 30.908275379726213 19.123436070615917 30 19.107181987017604 30.601916865692047 31.058105605531143 19.232795541759202 31 19.03611584604086 30.66991276588249 30.869610874590453 19.424360513486192 32 19.160579426578018 30.883790729047313 30.854052455007384 19.101577389367282 33 19.12988123472955 30.607163639489997 30.846748363817834 19.41620676196262 34 19.23524370643018 30.665110546649487 30.864361389497013 19.235284357423314 35 19.34780085766683 30.702323540405104 30.815553122749662 19.134322479178405 36 19.16462319326055 30.631910273630304 30.806486320652958 19.396980212456192 37 19.094931202272917 30.655167475077956 31.016422106273982 19.233479216375144 38 19.162861165760397 30.877166547401064 30.8300655552043 19.12990673163424 39 19.126984449611648 30.624176815883185 30.855576242432125 19.393262492073042 40 19.080173755814076 30.862120861200665 30.826126146027143 19.231579236958115 41 19.166308531401953 30.68650651340939 30.994488161074617 19.15269679411404 42 19.162400756139824 30.63538360132933 30.80769117940076 19.394524463130086 43 19.112034076051067 30.683140922378826 30.957101348691253 19.247723652878854 44 19.151135657799493 30.70483604125604 30.82335749526558 19.32067080567889 45 19.328737587637406 30.63626030884799 30.809441094001077 19.225561009513527 46 19.096720857425943 30.672644561086287 30.984601867570316 19.24603271391745 47 19.178553486369466 30.898802448153567 30.81530478780219 19.107339277674775 48 19.148141894959007 30.644078581689982 30.989765767679888 19.21801375567112 49 19.282382883541604 30.667430689399954 30.78536811534177 19.264818311716667 50 19.20535885416423 30.70911619976692 30.802239373507668 19.283285572561176 51 19.15339150334441 30.632404077546944 30.81687802089887 19.397326398209774 >>END_MODULE >>Per base GC content pass #Base %GC 1 37.21206500935546 2 35.20971824382735 3 35.20226581067568 4 36.63827515467186 5 37.07488611327157 6 37.97021465717452 7 37.63317498042043 8 37.329379930462025 9 37.55754633380939 10 37.81088163639172 11 37.8880481942077 12 37.86161238133694 13 37.57869091914245 14 37.705260333814806 15 37.56833203706163 16 37.829478844574766 17 37.937852644198884 18 37.94088594525307 19 38.12299245321624 20 37.93464622622335 21 38.23847345594862 22 38.071681615580204 23 38.04360625238401 24 38.315381591341534 25 38.14084171144516 26 38.339633169946325 27 38.453419421678774 28 38.25411311316244 29 38.443548574007245 30 38.33997752877681 31 38.46047635952706 32 38.2621568159453 33 38.546087996692165 34 38.4705280638535 35 38.482123336845234 36 38.56160340571674 37 38.32841041864806 38 38.29276789739463 39 38.52024694168469 40 38.31175299277219 41 38.319005325515995 42 38.556925219269914 43 38.35975772892992 44 38.47180646347838 45 38.55429859715093 46 38.342753571343394 47 38.28589276404424 48 38.36615565063013 49 38.54720119525827 50 38.48864442672541 51 38.55071790155418 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 12604.0 1 15812.5 2 19021.0 3 19652.5 4 20284.0 5 19273.5 6 18263.0 7 19023.5 8 19784.0 9 20350.0 10 20916.0 11 24342.0 12 27768.0 13 33370.5 14 38973.0 15 47133.0 16 55293.0 17 67054.5 18 78816.0 19 97773.5 20 116731.0 21 145302.5 22 173874.0 23 220132.0 24 266390.0 25 330694.5 26 477125.5 27 559252.0 28 655305.5 29 751359.0 30 863700.0 31 976041.0 32 1072616.5 33 1169192.0 34 1251582.0 35 1333972.0 36 1367360.5 37 1400749.0 38 1403403.5 39 1406058.0 40 1352908.0 41 1299758.0 42 1221022.0 43 1142286.0 44 1051024.5 45 959763.0 46 858103.5 47 756444.0 48 668885.5 49 581327.0 50 490297.5 51 399268.0 52 337861.0 53 276454.0 54 238759.0 55 201064.0 56 156956.5 57 112849.0 58 87995.5 59 63142.0 60 51271.5 61 39401.0 62 34505.0 63 29609.0 64 24169.0 65 18729.0 66 14475.0 67 10221.0 68 7432.0 69 4643.0 70 3406.0 71 2169.0 72 1656.0 73 1143.0 74 893.5 75 564.5 76 485.0 77 375.5 78 266.0 79 205.5 80 145.0 81 112.0 82 79.0 83 52.5 84 26.0 85 18.0 86 10.0 87 8.5 88 7.0 89 5.5 90 4.0 91 4.0 92 4.0 93 2.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04296666458901864 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 4.064963537277071E-5 18 0.0 19 0.002371228730078291 20 0.0 21 0.003096147227559369 22 6.774939228795118E-5 23 0.003184221437533705 24 0.011097350456766403 25 0.0039972141449891195 26 0.05271580213925481 27 0.05205185809483289 28 0.055100580747790694 29 0.6131320002059581 30 0.04267534220218045 31 0.0 32 0.05587292381987333 33 0.0010636654589208335 34 0.0033400450397959927 35 2.0324817686385355E-5 36 0.007425333394759449 37 3.658467183549363E-4 38 0.0034281192497703297 39 0.0035229683989734615 40 0.017330294547257912 41 0.0064971667204145175 42 3.1842214375337054E-4 43 8.06217768226619E-4 44 0.023427739853173517 45 0.02726235545667155 46 0.003848165481955627 47 0.003963339448845144 48 0.002737075448433228 49 0.02237084933348148 50 0.0017547092602579356 51 0.006869788377998249 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1.476028E7 >>END_MODULE >>Sequence Duplication Levels warn #Total Duplicate Percentage 49.22951392936239 #Duplication Level Relative count 1 100.0 2 44.919643677105334 3 14.026999724492606 4 3.9094499035724124 5 1.2535586371567637 6 0.6465240150610708 7 0.39581228762971804 8 0.28652768849297455 9 0.18642666911562128 10++ 18.046652585177704 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATCGGAAGAGCACACGTCTGAACTCCAGTCACGGCTACATCTCGTATGCC 22083 0.14961098298948258 TruSeq Adapter, Index 11 (100% over 51bp) >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position ACGGC 275570 0.99067193 5.4120617 32 CGGCT 259170 0.9204412 5.337415 33 CACGG 228575 0.82172525 5.188248 31 >>END_MODULE