lane7_Undetermined_L007_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Kmer Content

Basic Statistics

Measure	Value
Filename	lane7_Undetermined_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4649213
Filtered Sequences	0
Sequence length	51
%GC	44

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per base GC content

Per base GC content graph

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
TTTTT	1130910	3.4066231	4.252927	16
TGTGT	607510	2.6501606	31.795118	4
TGTTT	664710	2.4095707	26.869154	6
GTTTG	517360	2.2568965	31.56384	7
TTTGA	582685	2.0494006	25.703983	8
CTTTG	447725	2.0319839	32.633476	1
GTGTT	447025	1.9500716	31.50448	5
TTTGT	532135	1.9289869	26.368784	2
TTGTG	398880	1.7400472	31.428755	3
GAGGG	275305	1.6874895	7.5177803	11
TTGAG	389665	1.6492851	17.925661	9
TGAGG	303930	1.5480653	10.228519	10
TTGAC	298440	1.31417	5.743687	9
TGAGT	271135	1.1475984	5.4602356	10
TTGAT	300930	1.0584211	6.1768103	9