lane2_Undetermined_L002_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Kmer Content

Basic Statistics

Measure	Value
Filename	lane2_Undetermined_L002_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5345021
Filtered Sequences	0
Sequence length	51
%GC	44

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per base GC content

Per base GC content graph

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
TTTTT	1276045	3.59604	4.443601	16
TGTTT	684375	2.2821295	23.234575	6
TGTGT	551280	2.1752338	26.714806	4
GTTTG	539430	2.1284766	26.799728	7
TTTGA	612540	1.9424441	21.798687	8
CTTTG	449860	1.835021	27.356136	1
TTTGT	542915	1.8104143	22.757082	2
GTGTT	448395	1.7692715	26.518196	5
GAGGG	298970	1.5707407	6.1694617	11
TTGAG	413280	1.5507653	14.9029	9
TTGTG	392655	1.5493335	26.48059	3
TGAGG	323800	1.4376929	8.305667	10
TTGAC	365210	1.4166881	5.052034	9
TTGAT	338015	1.0718896	5.533931	9