SDW_SD2_3_TGACCA_L004_R2_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SDW_SD2_3_TGACCA_L004_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16318218
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAGTATCCAACTCAAAAGAAACAAGGCGTTAAGAGAATCGATCGTTGGA	36707	0.22494490513608778	No Hit
CTCAAAAGAAACAAGGCGTTAAGAGAATCGATCGTTGGAATATTAGTAAT	34231	0.20977167972630345	No Hit
CGTCAAGACACTCACAGGCAAACACATTACACTCGAAGTCGAACCAACCG	33763	0.20690371951153	No Hit
ATCCAACTCAAAAGAAACAAGGCGTTAAGAGAATCGATCGTTGGAATATT	30529	0.1870853790530314	No Hit
CAGACACTCGTTATCGATAACGGCTCTGGTATGTGCAAGGCTGGCTTCTC	22797	0.1397027543080991	No Hit
AAAGAAACAAGGCGTTAAGAGAATCGATCGTTGGAATATTAGTAATATGA	19272	0.11810113089554264	No Hit
GAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCTATCA	17937	0.10992009053929785	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACCCGC	3060	46.078762	5
AGACCCG	3180	44.787823	4
CGTTCGA	2555	39.949684	4
CGGACTA	1220	38.91401	4
CCTACTA	2770	37.367195	7
CCCGCTG	3800	36.85973	7
AACCTAC	3180	36.42743	5
ACCTACT	2970	35.965096	6
CGTGGAG	2920	35.28407	1
CTGACCC	3030	35.254105	3
ACCCGCT	4300	33.45256	6
CTGTTAG	4960	31.877308	8
AGTATCC	13005	31.24879	3
GGAGCGA	3410	29.932976	4
GAGCGAT	3490	29.1108	5
AGCGATC	3530	29.049202	6
TGGAGCG	3545	28.793339	3
CCGATCC	2880	28.188597	3
GTGGAGC	3790	27.432585	2
ACGACGC	4505	26.981054	7