SDW_NYCE32_8_1_AGTCAA_L002_R2_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SDW_NYCE32_8_1_AGTCAA_L002_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8458150
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTACATCTTCAGTCAACTTCCCAGCACGTGAACTTTCACGCAATGTTCG	19906	0.23534697303783922	No Hit
CTTACATCTTCAGTCTCTCTTCCAGCACGTGAACTCTCCCGCAAGGTTCT	13975	0.16522525611392563	No Hit
CTGAAGAAGACGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGC	12693	0.15006827734197195	No Hit
CCTGGAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCT	12668	0.14977270443300247	No Hit
CTGGAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCTA	11411	0.13491129857001827	No Hit
CAAGCATTCAACAAGAGCAAGAAAGTTCAGGCATTCGTCGACGAGTTCGT	11396	0.1347339548246366	No Hit
CGTTAAGACCCTTACAGGCAAGCACATCACACTCGAAGTCGAGCCAACAG	10187	0.12044004894687373	No Hit
CTTCAGTCAACTTCCCAGCACGTGAACTTTCACGCAATGTTCGCCCAACC	9502	0.11234135124111064	No Hit
TCTCAATCGATCTCATCCAACAAATTAAGGAATGGAAGAGAGGCTCAACA	9194	0.10869989300260695	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGGAG	2215	43.30564	1
AACCTAC	2045	40.627155	5
CCTACTA	1835	39.329906	7
ACCTACT	1960	38.271255	6
TACTGTC	2190	35.76939	4
GGAGCGA	2635	34.593323	4
AGCGATC	2595	34.394753	6
CTGTTAG	2300	34.27179	8
GTGGAGC	2755	32.910122	2
TGGAGCG	2860	32.037632	3
GTCTGAG	1570	31.758242	1
GAGCGAT	2825	31.426416	5
CTGACCC	1230	30.492365	3
TTCAGTC	14175	29.378038	9
GTTTGAC	1800	28.227869	1
TACATCT	12560	28.046804	3
CAACCTA	3000	28.010687	4
CTTACAT	13915	27.914955	1
GCGATCA	3310	27.39812	7
GACCCTT	3905	26.871176	7