SDW_B7268_METR_3_GTGAAA_L004_R2_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SDW_B7268_METR_3_GTGAAA_L004_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	14097820
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGGAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCT	41872	0.29701045977321316	No Hit
CTGGAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCTA	37982	0.26941754115175254	No Hit
CTGAAGAAGACGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGC	34906	0.24759856488449986	No Hit
CGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGCAAGGCTGGCT	19071	0.13527623419791146	No Hit
CGTGGAGCGATCAACTTGTCCAACTCAAGACAGAATCAACAGGCTGCGCT	18463	0.1309635106704441	No Hit
CTTACATCTTCAGTCAACTTCCCAGCACGTGAACTTTCACGCAATGTTCG	17761	0.1259840173870854	No Hit
CTGAAGAAGACGTTCAGACACTCGTTATCGATAACGGCTCCGGCATGTGC	15817	0.11219465137163051	No Hit
AGAAGACGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGCAAGG	14370	0.1019306531080692	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGGAG	4210	58.978985	1
TGGAGCG	4755	51.720184	3
GGAGCGA	4815	50.976727	4
GTGGAGC	5325	46.716396	2
GAGCGAT	5655	43.90863	5
AGCGATC	5985	41.249332	6
CCTGACG	2630	38.089424	6
ACCTACT	2785	38.015205	6
GTCTGAG	2225	37.127605	1
TGGAACG	15100	36.189217	3
GACGTAC	2845	35.715267	9
AACCTAC	3190	35.57034	5
CCTACTA	2970	35.172195	7
GGAACGA	16180	33.68535	4
GCGATCA	7365	33.524616	7
ACCTGAC	3105	33.3331	5
GACCTGA	3090	32.880093	4
CTGACGT	3150	32.10719	7
CGTACTG	1410	31.99173	7
CCGATCC	3055	31.236734	3