SDW_B7268_METR_1_GTGAAA_L002_R2_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SDW_B7268_METR_1_GTGAAA_L002_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19449101
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGAAGAAGACGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGC	49435	0.2541762727233511	No Hit
CCTGGAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCT	40319	0.20730521169076144	No Hit
CTGGAACGATCAGCTCGTCTCTCTTAAGACAGAATCCTCTGGCTGCGCTA	36109	0.1856589669620205	No Hit
CGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGCAAGGCTGGCT	28745	0.14779603437711594	No Hit
CTTACATCTTCAGTCAACTTCCCAGCACGTGAACTTTCACGCAATGTTCG	26489	0.13619652651297354	No Hit
CAGACACTCGTTATCGATAACGGCTCTGGTATGTGCAAGGCTGGCTTCTC	24257	0.12472041766866243	No Hit
AGAAGACGTTCAGACACTCGTTATCGATAACGGCTCTGGTATGTGCAAGG	21497	0.11052953038806267	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGGAG	5125	49.38469	1
GGAGCGA	5800	42.89398	4
TGGAGCG	5985	41.726646	3
AACCTAC	4335	41.070995	5
CCTGACG	4560	39.35682	6
GTGGAGC	6520	39.09924	2
CCTACTA	4170	38.48699	7
ACCTACT	4235	38.3412	6
GAGCGAT	6720	37.586803	5
AGCGATC	6895	36.28853	6
CTGACGT	5200	35.063972	7
TGACCTG	5215	34.95979	3
GACGTAC	5125	34.931625	9
GTCTGAG	3175	32.304943	1
TGGAACG	15930	31.532747	3
CCGATCC	4440	30.475708	3
ACCTGAC	5895	30.44395	5
GACCTGA	6130	29.973919	4
GGAACGA	16930	29.586157	4
TGACGTA	6270	29.235922	8