NYCLib9_ACTTGA_L007_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	NYCLib9_ACTTGA_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1035550
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGTC	2910	0.0	6.4413457	94-95
CACGTCT	2785	0.0	6.3896723	94-95
CAGTCAC	1230	5.456968E-12	6.172874	94-95
CGTCTGA	2395	0.0	6.1422668	94-95
CACACGT	3065	0.0	5.9609194	92-93
ACGTCTG	2575	0.0	5.897192	94-95
GCACACG	3310	0.0	5.5913877	92-93
TCACACT	1320	2.0190782E-10	5.572246	94-95
TCCAGTC	1675	0.0	5.524625	92-93
CTCCAGT	1645	0.0	5.481005	94-95
AGTCACA	1280	3.0613592E-9	5.375775	92-93
CCAGTCA	1350	2.077286E-9	5.2726626	94-95
GTCACAC	1095	5.041966E-7	5.2023187	90-91
GTCTGAA	2630	0.0	5.1423497	94-95
AGCACAC	3640	0.0	5.0191693	94-95
GAACTCC	2135	0.0	5.0010033	94-95