NYCLib22_CGTACG_L007_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	NYCLib22_CGTACG_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8876048
Sequences flagged as poor quality	0
Sequence length	101
%GC	43

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTACGA	2480	0.0	7.84603	94-95
GTACGAT	2445	0.0	7.1819215	94-95
ACCGTAC	3150	0.0	6.9307227	92-93
CACGTCT	11815	0.0	6.587611	94-95
ACGTCTG	10850	0.0	6.495529	94-95
CCGTACG	2965	0.0	6.40275	92-93
ACACGTC	12225	0.0	6.366677	94-95
CGTCTGA	9835	0.0	6.152529	94-95
CACACGT	13415	0.0	5.837468	92-93
TACGATC	2280	0.0	5.8282876	94-95
CTCGTAT	1780	0.0	5.7341256	42-43
CGTATGC	1765	0.0	5.648372	44-45
GCACACG	14200	0.0	5.5147634	92-93
TCGGAAG	21045	0.0	5.4686565	94-95
CGGAAGA	20215	0.0	5.399728	94-95
ATCGGAA	22240	0.0	5.270842	94-95
TCGTATG	2125	0.0	5.1382785	42-43
TATGCCG	1850	0.0	5.1322403	46-47
CACCGTA	3900	0.0	5.112386	90-91