NYCLib21_GTTTCG_L007_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	NYCLib21_GTTTCG_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4620382
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGTTTC	3970	0.0	6.455829	94-95
CACGTTT	4405	0.0	6.1415462	94-95
AGTCACG	4415	0.0	6.075759	90-91
GTCACGT	4500	0.0	5.906644	92-93
CTCCAGT	7595	0.0	5.7179728	94-95
TCACGTT	4725	0.0	5.675601	92-93
TCTCGTA	1835	0.0	5.560978	94-95
CTCGTAT	1470	2.0008883E-11	5.4888372	94-95
TCCAGTC	7520	0.0	5.3647547	94-95
CGTTTCG	3835	0.0	5.197957	94-95
TCGTATG	1700	9.094947E-12	5.1652107	92-93
CACGTCT	11070	0.0	5.1235275	94-95
GTTTCGA	3510	0.0	5.0707583	94-95
CAGTCAC	5720	0.0	5.061539	94-95
CGTCTGA	9710	0.0	5.010181	94-95
CCAGTCA	6500	0.0	5.0017962	94-95