NYCLib18_GTCCGC_L007_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	NYCLib18_GTCCGC_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1847981
Sequences flagged as poor quality	0
Sequence length	101
%GC	44

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCATCT	1365	0.0	7.4749465	94-95
CTCGTAT	770	2.8194336E-10	7.3973317	90-91
GTCACGT	2390	0.0	7.049084	94-95
CGTATGC	760	1.2556484E-8	6.8689938	92-93
AGTCACG	2405	0.0	6.807791	94-95
TCCGCAT	1530	0.0	6.513736	94-95
GTCCGCA	1755	0.0	6.35467	94-95
ACGTCCG	1970	0.0	5.9021997	92-93
TCCAGTC	4150	0.0	5.889269	94-95
CTCCAGT	4160	0.0	5.875112	94-95
CCGCATC	1945	0.0	5.8559036	94-95
TATGCCG	785	7.186127E-6	5.7432303	94-95
CCAGTCA	3435	0.0	5.7335505	94-95
CACGTCT	6550	0.0	5.723848	94-95
CAGTCAC	3110	0.0	5.7223334	94-95
ACGTCTG	6175	0.0	5.6871805	94-95
TCACGTC	2305	0.0	5.560033	90-91
TCGTATG	860	5.6361678E-6	5.5193267	90-91
GCATCTC	1725	0.0	5.502286	94-95
CGTCTGA	5545	0.0	5.4774785	94-95