LONLib33_CAGGCG_L007_R1_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	LONLib33_CAGGCG_L007_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2720035
Sequences flagged as poor quality	0
Sequence length	101
%GC	47

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTATAGC	525	0.0042838403	8.190326	1
GGTTACG	550	0.006507297	7.818038	1
CACACGT	3600	0.0	6.5918193	94-95
GCACACG	4055	0.0	6.3788652	94-95
AGCACAC	4940	0.0	6.052731	94-95
TCGGAAG	6720	0.0	5.967951	94-95
GAGCACA	5285	0.0	5.882123	94-95
CGTCTGA	2890	0.0	5.8299966	94-95
ACACGTC	3355	0.0	5.729283	94-95
AGAGCAC	5345	0.0	5.6830573	92-93
GTGCAAA	1350	1.5059234E-4	5.6624475	1
CGGAAGA	6685	0.0	5.5022216	94-95
ACGTCTG	3075	0.0	5.4792485	94-95
CACGTCT	3225	0.0	5.4452996	92-93
ATCGGAA	7105	0.0	5.2773123	92-93
GATCGGA	7645	0.0	5.2458634	94-95
GTTGTCA	1200	0.0072567365	5.1758313	1
CTGAACT	3315	0.0	5.0825615	94-95