FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | lane8_Undetermined_L008_R2_001.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4083740 |
| Filtered Sequences | 0 |
| Sequence length | 51 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
![[FAIL]](Icons/error.png)
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| AAAAA | 967815 | 3.6322172 | 3.8461134 | 36 |
| TTTGA | 590370 | 2.1263752 | 7.796047 | 8 |
| TGTTT | 584395 | 1.9523175 | 7.2943983 | 6 |
| CTTTG | 402255 | 1.7782716 | 8.9828 | 1 |
| GTTTG | 408375 | 1.7689915 | 8.639306 | 7 |
| TTGAG | 328750 | 1.5353379 | 6.052826 | 9 |
| TGTGT | 323475 | 1.4012231 | 8.073517 | 4 |
| GTGTT | 310835 | 1.3464695 | 8.267784 | 5 |
| TTTGT | 396780 | 1.3255428 | 6.6411653 | 2 |
| AACTT | 302200 | 1.1975998 | 5.3452077 | 2 |
| TTGTG | 242675 | 1.0512152 | 7.978188 | 3 |