FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | lane8_Undetermined_L008_R1_001.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 4083740 |
| Filtered Sequences | 0 |
| Sequence length | 51 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
![[FAIL]](Icons/error.png)
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TTTTT | 818255 | 3.1746728 | 3.7018657 | 13 |
| GCGGC | 315130 | 3.0431416 | 3.5684245 | 7 |
| TGTTT | 417630 | 1.929189 | 10.821826 | 6 |
| GTTTG | 312550 | 1.7189976 | 12.150266 | 7 |
| TTTGA | 364700 | 1.5476575 | 9.553173 | 8 |
| TGTGT | 276030 | 1.518141 | 11.830973 | 4 |
| TTTGT | 322290 | 1.4887779 | 10.272404 | 2 |
| CTTTG | 254910 | 1.4299536 | 12.128323 | 1 |
| TTGAG | 263315 | 1.330416 | 7.1303525 | 9 |
| GTGTT | 238245 | 1.3103268 | 11.847186 | 5 |
| TTGTG | 207020 | 1.1385919 | 11.671377 | 3 |