lane5_Undetermined_L005_R2_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Kmer Content

Basic Statistics

Measure	Value
Filename	lane5_Undetermined_L005_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5257550
Filtered Sequences	0
Sequence length	51
%GC	43

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per base GC content

Per base GC content graph

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
AAAAA	1919495	4.7919655	5.183801	36
TTTTT	1576240	3.4364247	4.1588707	16
TTTGA	809845	2.3118582	14.159072	8
TGTTT	823010	2.2866302	13.854864	6
GTTTG	596840	2.1132705	16.808659	7
CTTTG	559390	2.0539794	17.549608	1
TGTGT	565400	2.0019488	16.42838	4
GAGGG	314190	1.8563961	5.5954585	11
GTGTT	485845	1.7202634	16.505001	5
TTGAG	460090	1.6738187	10.574535	9
TGAGG	356915	1.6547667	6.5707917	10
TTTGT	574555	1.5963291	13.246814	2
TTGTG	406095	1.4378873	16.25777	3
ACTTT	415490	1.2299972	6.298622	3
AACTT	386690	1.176183	6.595714	2
TAACT	248265	0.75513995	6.2110186	1