lane2_Undetermined_L002_R2_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Kmer Content

Basic Statistics

Measure	Value
Filename	lane2_Undetermined_L002_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	5341076
Filtered Sequences	0
Sequence length	51
%GC	44

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per base GC content

Per base GC content graph

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
AAAAA	1600080	4.278818	4.6130123	36
TTTTT	1870295	3.889502	4.7783623	18
GGGGG	450000	3.0963886	4.8607717	16
TTTGA	839340	2.3318105	14.8406515	8
TGTTT	861775	2.2767198	14.121619	6
GTTTG	643205	2.1587229	17.226341	7
TGTGT	617545	2.072603	16.800783	4
CTTTG	580505	2.0334427	18.159447	1
GAGGG	348375	1.9842564	6.147749	11
GTGTT	531275	1.7830638	16.885277	5
TTGAG	482305	1.7021935	10.839013	9
TGAGG	370250	1.6600229	6.9178934	10
TTTGT	602045	1.5905402	13.659103	2
TTGTG	452180	1.5176055	16.715729	3
AACTT	428500	1.3065448	8.124634	2
ACTTT	446055	1.2933685	7.5611825	3
TAACT	278845	0.85022986	7.713775	1