140701_JD_D_11_ACTTGA_L008_R2_001.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Kmer Content

Basic Statistics

Measure	Value
Filename	140701_JD_D_11_ACTTGA_L008_R2_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34870697
Filtered Sequences	0
Sequence length	51
%GC	42

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per base GC content

Per base GC content graph

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Kmer Content

Kmer graph

Sequence	Count	Obs/Exp Overall	Obs/Exp Max	Max Obs/Exp Position
TGTGT	7979215	4.030419	28.710936	4
TTTTT	11199385	3.2984512	4.0267262	17
TGTTT	7022435	2.7085738	21.962069	6
GTTTG	5348630	2.7016716	27.892513	7
GGGGG	2269410	2.5746257	5.1072345	13
GTGTT	5007010	2.5291142	27.830645	5
CTTTG	4581090	2.4797542	29.93785	1
TTTGA	5841390	2.3350494	22.274078	8
TTGTG	4605480	2.3262956	27.844053	3
GAGGG	2489100	2.2347727	9.041755	11
TTTGT	5472645	2.1108153	21.527899	2
TGAGG	2934450	2.0117807	11.067769	10
TTGAG	3801445	1.9900575	17.846224	9
AGGGG	1944700	1.7459974	5.3778806	12
ACTTT	3453130	1.4792534	11.994165	3
AACTT	3244510	1.440475	12.815001	2
TGAGT	2513775	1.3159618	5.712462	10
TAACT	2439865	1.0832343	12.593464	1
TTGAT	2572975	1.0285263	5.086023	9