##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL7_ATCACG_L007_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10179575 Filtered Sequences 0 Sequence length 101 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.232860900381404 34.0 33.0 34.0 31.0 34.0 2 33.377984640812606 34.0 34.0 34.0 31.0 34.0 3 33.404714047492156 34.0 34.0 34.0 31.0 34.0 4 36.651176105092794 37.0 37.0 37.0 35.0 37.0 5 36.59372979716737 37.0 37.0 37.0 35.0 37.0 6 36.588557184361825 37.0 37.0 37.0 35.0 37.0 7 36.59077328866873 37.0 37.0 37.0 35.0 37.0 8 36.58615069882583 37.0 37.0 37.0 35.0 37.0 9 38.44985139359944 39.0 39.0 39.0 37.0 39.0 10-14 36.868241513029766 39.4 38.4 39.4 26.2 39.4 15-19 39.544645351107484 41.0 39.0 41.0 36.6 41.0 20-24 39.99188577126255 41.0 40.0 41.0 38.0 41.0 25-29 39.86113663880859 41.0 40.0 41.0 38.0 41.0 30-34 39.70619728230304 41.0 40.0 41.0 38.0 41.0 35-39 39.53785345655393 41.0 40.0 41.0 37.0 41.0 40-44 39.34849853751261 41.0 39.4 41.0 36.6 41.0 45-49 39.20141033392848 40.4 39.0 41.0 36.0 41.0 50-54 39.133861050191186 40.4 39.0 41.0 35.6 41.0 55-59 38.8394933580233 40.0 38.4 41.0 35.0 41.0 60-64 38.59049528099159 40.0 37.6 41.0 35.0 41.0 65-69 38.027499203061026 39.4 36.6 41.0 34.4 41.0 70-74 37.253683341396865 38.4 35.4 40.4 34.0 41.0 75-79 36.08195972818119 36.2 34.8 39.2 32.8 40.2 80-84 35.648152540749486 35.8 35.0 37.6 33.2 39.2 85-89 34.92345165687173 35.0 35.0 36.4 33.0 37.8 90-94 34.402729033383025 35.0 35.0 35.8 33.0 36.6 95-99 34.09632156548775 35.0 35.0 35.0 32.4 36.0 100-101 33.734268522998256 35.0 34.0 35.0 31.5 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 10.0 13 63.0 14 261.0 15 820.0 16 2025.0 17 3885.0 18 5527.0 19 6998.0 20 7958.0 21 9039.0 22 10530.0 23 12688.0 24 15605.0 25 18647.0 26 23184.0 27 29124.0 28 36663.0 29 47345.0 30 59512.0 31 75171.0 32 98939.0 33 139209.0 34 219605.0 35 395137.0 36 885509.0 37 2281879.0 38 3934915.0 39 1831208.0 40 28116.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.136112135743268 30.815610475839172 30.208297061354973 19.839980327062584 2 20.107028043901636 30.243669308394505 30.374647271619885 19.27465537608397 3 20.38176446462647 29.393928528450353 30.236596321555666 19.987710685367514 4 20.394672665607356 29.140116360457093 30.281097197083373 20.18411377685218 5 20.657375185113327 29.477321007998857 30.188244597637915 19.677059209249894 6 20.64017407406498 29.652662316452304 29.493520112578373 20.21364349690434 7 20.595496373866297 29.899440791978055 29.812423406674636 19.69263942748101 8 20.15706942578644 29.928665980652436 29.812845821166405 20.101418772394723 9 20.16671619394719 29.62630561688479 30.107563429710964 20.099414759457048 10-14 20.25178990419853 29.818200633418346 29.868399743058866 20.06160971932426 15-19 20.113978517397506 29.590668067092913 30.079325374868095 20.21602804064149 20-24 20.239365665014518 29.50612026741601 29.910318674827757 20.344195392741717 25-29 20.425730936704138 29.453131393010025 29.70281568729539 20.41832198299045 30-34 20.505075879736832 29.444027988805328 29.62500445500784 20.42589167645 35-39 20.607026403233505 29.334999599884625 29.541607666921838 20.516366329960032 40-44 20.64232698225133 29.353995058016668 29.494081706975688 20.50959625275631 45-49 20.694080181020453 29.272352178208827 29.458293527632307 20.575274113138413 50-54 20.616129904151208 29.297767114486522 29.472157848635145 20.613945132727125 55-59 20.69204752679174 29.253280143320996 29.447217890227662 20.6074544396596 60-64 20.642325440895128 29.28153876758116 29.42857437564928 20.647561415874435 65-69 20.656142184737433 29.32217945493448 29.34513393752958 20.676544422798504 70-74 20.692978079839914 29.344067886005327 29.312119375889058 20.650834658265705 75-79 20.700617048329182 29.295420472312212 29.336440435917925 20.66752204344068 80-84 20.705188960981804 29.325684987488525 29.32638050599168 20.642745545537995 85-89 20.678543255397074 29.322865543667152 29.31561130915512 20.682979891780654 90-94 20.671095122463427 29.290578074915402 29.29014187322454 20.74818492939663 95-99 20.69745592757787 29.33303688336299 29.239783248073515 20.72972394098563 100-101 20.794064188666958 29.30286665472397 29.12037132320634 20.782697833402732 >>END_MODULE >>Per base GC content pass #Base %GC 1 38.97609246280585 2 39.381683419985606 3 40.36947514999398 4 40.57878644245954 5 40.33443439436322 6 40.85381757096932 7 40.28813580134731 8 40.25848819818116 9 40.26613095340424 10-14 40.31339962352279 15-19 40.330006558039 20-24 40.583561057756235 25-29 40.84405291969458 30-34 40.93096755618683 35-39 41.12339273319353 40-44 41.15192323500764 45-49 41.269354294158866 50-54 41.23007503687833 55-59 41.299501966451345 60-64 41.289886856769556 65-69 41.33268660753593 70-74 41.34381273810562 75-79 41.36813909176986 80-84 41.3479345065198 85-89 41.36152314717773 90-94 41.419280051860056 95-99 41.4271798685635 100-101 41.576762022069694 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 314.0 1 276.5 2 282.5 3 383.0 4 460.5 5 509.5 6 655.5 7 866.0 8 1097.5 9 1309.5 10 1581.5 11 2088.5 12 2770.5 13 3586.5 14 4612.0 15 5981.0 16 7844.5 17 10790.5 18 15448.0 19 22228.0 20 31548.0 21 43261.0 22 57431.5 23 74288.0 24 93924.5 25 115949.0 26 140191.0 27 166607.5 28 193891.0 29 221739.0 30 249432.5 31 275039.5 32 299600.5 33 324186.5 34 347021.5 35 367583.0 36 386385.5 37 400982.0 38 408319.0 39 407398.0 40 400282.5 41 386943.5 42 367142.0 43 344034.0 44 321203.0 45 301711.5 46 285896.0 47 273955.0 48 264311.5 49 253426.0 50 240448.5 51 225834.5 52 209229.0 53 192631.5 54 178203.5 55 165450.5 56 153503.0 57 141415.5 58 127491.5 59 112152.5 60 96560.0 61 81078.0 62 67171.5 63 55755.5 64 46230.0 65 37997.0 66 31391.0 67 25921.0 68 20985.5 69 16785.0 70 13297.0 71 10547.5 72 8511.0 73 6867.0 74 5564.0 75 4549.0 76 3779.0 77 3203.0 78 2629.0 79 2097.5 80 1658.0 81 1251.0 82 903.5 83 660.0 84 423.0 85 254.0 86 165.5 87 103.0 88 68.0 89 44.0 90 32.0 91 25.5 92 26.0 93 23.5 94 16.5 95 10.0 96 6.5 97 7.5 98 4.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.13089937448272643 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 2.4511671656233194 15-19 7.465930552110477E-5 20-24 1.9450713806814135E-4 25-29 0.0 30-34 1.9057770093545162E-4 35-39 1.1002423971531229E-4 40-44 1.7878938953738244E-4 45-49 0.0012633140381597464 50-54 2.0040129376717593E-4 55-59 1.9450713806814135E-4 60-64 0.0 65-69 0.0029431484123846035 70-74 0.019142252991897993 75-79 0.015757042902085794 80-84 0.001169007546975193 85-89 0.006803820395252257 90-94 0.007833332924016966 95-99 0.004463840582735527 100-101 0.004032584857422829 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.0179575E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 5.752761914262207 #Duplication Level Relative count 1 100.0 2 3.423457750541117 3 0.7514778181741206 4 0.4530035298289065 5 0.33498975979170303 6 0.20586258540122035 7 0.16299659718142898 8 0.11166325326390102 9 0.08784881536401691 10++ 0.3106461121607104 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 1846500 3.6219807 3.9670706 25-29 CTGGG 1795585 3.4872112 3.7145002 85-89 CCAGG 1648890 3.2260041 3.4644809 25-29 GGAGG 1616910 3.1471121 3.4359295 70-74 CCTCC 1595315 3.1224046 3.4366083 70-74 CCTGG 1587435 3.090948 3.275654 3 >>END_MODULE