##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL4_GCCAAT_L008_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13406231 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.18936187210261 34.0 33.0 34.0 31.0 34.0 2 33.35986124660988 34.0 34.0 34.0 31.0 34.0 3 33.401884317822066 34.0 34.0 34.0 31.0 34.0 4 36.65040233903175 37.0 37.0 37.0 35.0 37.0 5 36.58974218779312 37.0 37.0 37.0 35.0 37.0 6 36.593670286600315 37.0 37.0 37.0 35.0 37.0 7 36.59163996204452 37.0 37.0 37.0 35.0 37.0 8 36.58460659077111 37.0 37.0 37.0 35.0 37.0 9 38.451546523403934 39.0 39.0 39.0 37.0 39.0 10-14 38.757750213314985 39.4 39.2 39.4 37.2 39.4 15-19 40.045122033179936 41.0 40.0 41.0 38.0 41.0 20-24 39.98459053853391 41.0 40.0 41.0 38.0 41.0 25-29 39.849812031435235 41.0 40.0 41.0 38.0 41.0 30-34 39.6860346953592 41.0 40.0 41.0 37.8 41.0 35-39 39.50768480716168 41.0 40.0 41.0 37.0 41.0 40-44 39.31068236851954 41.0 39.2 41.0 36.4 41.0 45-49 39.155597363643814 40.2 39.0 41.0 35.8 41.0 50-54 39.08539649958291 40.4 39.0 41.0 35.4 41.0 55-59 38.78919016090354 40.0 38.2 41.0 35.0 41.0 60-64 38.53974916589159 40.0 37.6 41.0 35.0 41.0 65-69 37.98034886911914 39.4 36.4 41.0 34.2 41.0 70-74 37.245642432985086 38.4 35.2 40.4 34.0 41.0 75-79 36.08961012233789 36.4 34.8 39.2 32.8 40.2 80-84 35.679815527570724 35.8 35.0 37.8 33.0 39.4 85-89 34.9406982618754 35.0 35.0 36.6 33.0 38.0 90-94 34.41506587496516 35.0 35.0 35.8 33.0 36.8 95-99 34.081859069860876 35.0 35.0 35.0 32.0 36.0 100-101 33.69987657231924 35.0 34.0 35.0 31.5 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 4.0 12 25.0 13 94.0 14 353.0 15 1087.0 16 2841.0 17 5273.0 18 7610.0 19 9535.0 20 11236.0 21 12756.0 22 15146.0 23 17643.0 24 21388.0 25 25892.0 26 31725.0 27 39262.0 28 48577.0 29 61043.0 30 76574.0 31 97370.0 32 128584.0 33 177088.0 34 274188.0 35 475577.0 36 1009530.0 37 2579423.0 38 5349918.0 39 2878267.0 40 48215.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.079754445425746 31.170885225017 29.947840417611282 19.801519911945974 2 20.067668534131627 30.357368898089256 30.54250668961321 19.03245587816591 3 20.179253217267416 29.461624960139638 30.377411901605043 19.981709920987903 4 20.215458262047996 29.331960636767302 30.423954082195902 20.028627018988804 5 20.49587240440658 29.66007373735392 30.26050349274155 19.583550365497953 6 20.477259846527705 29.777107573676 29.62883287267576 20.116799707120542 7 20.501556328546034 30.045357267079766 29.852215734608777 19.600870669765424 8 19.98870525205779 29.94708206952424 30.043902719563757 20.020309958854206 9 19.979478199353718 29.749815589482232 30.284499797146562 19.98620641401748 10-14 20.011490179454615 29.864077383121323 30.109054513531802 20.015377923892256 15-19 20.030954010332167 29.708702485606075 30.14470188266167 20.115641621400087 20-24 20.18120205736964 29.570579307997175 29.97345990238222 20.274758732250962 25-29 20.335583063361852 29.546937234587965 29.791994928209053 20.32548477384113 30-34 20.466317664643277 29.516587293097995 29.674342354067427 20.342752688191293 35-39 20.52593930269452 29.4575750613361 29.612489764263238 20.403995871706144 40-44 20.584275761718203 29.434873561950837 29.547055837733083 20.433794838597876 45-49 20.599740916545205 29.382459086674206 29.51985390740102 20.49794608937957 50-54 20.562182162553754 29.393319103127023 29.522517302411178 20.521981431908046 55-59 20.615362094999202 29.357508208131932 29.50929278273381 20.517836914135053 60-64 20.572151218439355 29.36673712193697 29.482758718433168 20.578352941190513 65-69 20.584523302270263 29.35850442185034 29.445641562339333 20.611330713540067 70-74 20.64731401798737 29.38442164005118 29.403957818089577 20.564306523871874 75-79 20.632090195628404 29.358625300817543 29.4311227630408 20.57816174051325 80-84 20.64399810699896 29.372920951601078 29.43118171236031 20.551899229039655 85-89 20.60168173583607 29.381994917905697 29.395429862888367 20.620893483369866 90-94 20.596341341307664 29.34612513272965 29.397233386605976 20.660300139356714 95-99 20.615799004014807 29.403404021633666 29.330940984362226 20.6498559899893 100-101 20.677579879618037 29.358505169654187 29.281404380139413 20.68251057058836 >>END_MODULE >>Per base GC content pass #Base %GC 1 38.881274357371716 2 39.10012441229754 3 40.16096313825532 4 40.244085281036796 5 40.07942276990453 6 40.59405955364824 7 40.10242699831146 8 40.009015210912004 9 39.9656846133712 10-14 40.02686810334687 15-19 40.146595631732254 20-24 40.455960789620605 25-29 40.66106783720298 30-34 40.80907035283457 35-39 40.92993517440066 40-44 41.01807060031608 45-49 41.097687005924776 50-54 41.0841635944618 55-59 41.13319900913426 60-64 41.15050415962987 65-69 41.195854015810326 70-74 41.21162054185924 75-79 41.21025193614166 80-84 41.19589733603861 85-89 41.222575219205936 90-94 41.25664148066438 95-99 41.26565499400411 100-101 41.3600904502064 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 336.0 1 331.5 2 382.0 3 563.5 4 732.5 5 817.0 6 1022.5 7 1373.0 8 1836.0 9 2310.5 10 3065.5 11 4396.5 12 6126.5 13 8007.0 14 10001.0 15 12721.0 16 16020.5 17 20292.0 18 26527.0 19 35125.5 20 46636.5 21 61216.5 22 79253.5 23 100766.5 24 126382.5 25 155901.5 26 188001.5 27 221787.5 28 256952.0 29 292102.5 30 326994.0 31 360653.5 32 392927.0 33 424798.0 34 454128.0 35 481585.0 36 506354.0 37 525353.0 38 534449.0 39 533226.0 40 523018.5 41 503480.5 42 476450.5 43 446397.5 44 417427.5 45 392863.0 46 373563.5 47 358847.0 48 346444.0 49 332213.5 50 315481.5 51 295279.5 52 273306.5 53 252670.5 54 233820.5 55 217003.0 56 201350.5 57 185531.0 58 167618.0 59 147911.5 60 127628.5 61 107467.0 62 89620.0 63 74645.0 64 61998.5 65 50943.0 66 41762.0 67 34095.5 68 27536.0 69 22126.5 70 17485.0 71 13852.0 72 11075.5 73 8787.5 74 7024.5 75 5734.5 76 4742.5 77 3969.0 78 3285.5 79 2640.0 80 2144.0 81 1706.5 82 1310.5 83 938.0 84 609.0 85 378.5 86 223.5 87 143.5 88 106.5 89 72.0 90 56.5 91 50.0 92 36.5 93 23.5 94 23.5 95 13.0 96 3.0 97 4.0 98 2.5 99 2.0 100 1.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.13491487652271544 2 0.0 3 4.177162097236725E-4 4 1.11888270461698E-4 5 0.0 6 2.461541950157356E-4 7 0.0 8 0.0 9 0.0 10-14 0.0 15-19 1.4769251700944136E-4 20-24 1.909559815879646E-4 25-29 1.4918436061559733E-6 30-34 3.729609015389934E-5 35-39 1.1039642685554202E-4 40-44 9.995352161245021E-5 45-49 3.6400983990205745E-4 50-54 5.2214526215459063E-5 55-59 0.0019200027211227378 60-64 0.002078138143375271 65-69 0.0017663428296886723 70-74 0.01776039813128686 75-79 0.016228274747764677 80-84 0.004764948478062178 85-89 0.006649146952637173 90-94 0.010078895403189757 95-99 0.007845605524774264 100-101 0.002998605648373506 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.3406231E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.853683611646226 #Duplication Level Relative count 1 100.0 2 4.220401733809828 3 0.7517105030513124 4 0.48756704046806437 5 0.3809452371129602 6 0.25985715893078154 7 0.20520678736183368 8 0.17681002566424311 9 0.11090810700757069 10++ 0.564184718255903 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2363480 3.546133 3.9064043 25-29 CTGGG 2304120 3.4194584 3.604647 85-89 GGAGG 2132255 3.1702218 3.4064727 70-74 CCAGG 2117595 3.1675858 3.44003 25-29 CCTCC 2086155 3.124291 3.4724233 70-74 CCTGG 2034240 3.0281124 3.2226746 85-89 AAAAA 8726020 3.0064235 3.442242 10-14 >>END_MODULE