Basic Statistics
Measure | Value |
---|---|
Filename | ZL4_GCCAAT_L007_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 13606977 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCAG | 2381715 | 3.546722 | 3.939791 | 25-29 |
CTGGG | 2326120 | 3.4249766 | 3.5986097 | 1 |
CCAGG | 2129190 | 3.160945 | 3.3913953 | 25-29 |
GGAGG | 2140255 | 3.1578994 | 3.4083345 | 70-74 |
CCTCC | 2104045 | 3.1266918 | 3.4848785 | 70-74 |
CCTGG | 2052835 | 3.0318968 | 3.2113476 | 70-74 |