##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL4_GCCAAT_L007_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13606977 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.22694408905079 34.0 33.0 34.0 31.0 34.0 2 33.371838726559176 34.0 34.0 34.0 31.0 34.0 3 33.398736986179955 34.0 34.0 34.0 31.0 34.0 4 36.64914367092705 37.0 37.0 37.0 35.0 37.0 5 36.58996381047752 37.0 37.0 37.0 35.0 37.0 6 36.58297129479972 37.0 37.0 37.0 35.0 37.0 7 36.58714084693463 37.0 37.0 37.0 35.0 37.0 8 36.58287193400856 37.0 37.0 37.0 35.0 37.0 9 38.443806511909294 39.0 39.0 39.0 37.0 39.0 10-14 36.86068176642027 39.4 38.4 39.4 26.2 39.4 15-19 39.53527067768248 41.0 39.0 41.0 36.6 41.0 20-24 39.97936682041867 41.0 40.0 41.0 38.0 41.0 25-29 39.844901170921354 41.0 40.0 41.0 38.0 41.0 30-34 39.68711626395782 41.0 40.0 41.0 37.8 41.0 35-39 39.51579957840746 41.0 40.0 41.0 37.0 41.0 40-44 39.322358742871394 41.0 39.2 41.0 36.4 41.0 45-49 39.16436201810292 40.0 39.0 41.0 36.0 41.0 50-54 39.085910162117564 40.0 39.0 41.0 35.4 41.0 55-59 38.783258294623415 40.0 38.2 41.0 35.0 41.0 60-64 38.530232203670224 40.0 37.6 41.0 35.0 41.0 65-69 37.966730214947816 39.4 36.4 41.0 34.2 41.0 70-74 37.20851849753255 38.2 35.2 40.4 34.0 41.0 75-79 36.05001222534587 36.2 34.8 39.2 32.8 40.2 80-84 35.62913486221076 35.8 35.0 37.6 33.0 39.2 85-89 34.91115087502537 35.0 35.0 36.4 33.0 37.8 90-94 34.392817111398074 35.0 35.0 35.8 33.0 36.6 95-99 34.08589628688283 35.0 34.8 35.0 32.2 36.0 100-101 33.72338907459019 35.0 34.0 35.0 31.5 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 6.0 12 26.0 13 90.0 14 332.0 15 1226.0 16 2872.0 17 5451.0 18 7808.0 19 9608.0 20 11147.0 21 12751.0 22 14824.0 23 17818.0 24 21053.0 25 25707.0 26 31709.0 27 39725.0 28 49369.0 29 62556.0 30 80058.0 31 102035.0 32 135093.0 33 190437.0 34 301986.0 35 545851.0 36 1219714.0 37 3065720.0 38 5193442.0 39 2419700.0 40 38861.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.033694464239094 31.128886557682783 30.01196803539666 19.82545094268147 2 20.05462344795615 30.381825441462862 30.540758612291324 19.022792498289665 3 20.142923736844708 29.49023137174407 30.386786131849856 19.980058759561363 4 20.21764275782931 29.318385707567522 30.427419697997575 20.036551836605586 5 20.4625832762119 29.66342928337426 30.2840741187407 19.589913321673137 6 20.48468223323961 29.783044389653924 29.645203339433877 20.087070037672586 7 20.496308621672544 30.021495590093227 29.891305026825577 19.590890761408648 8 20.00563387444544 29.970852453120187 30.026926627420625 19.996587045013744 9 19.987547564752994 29.763598483336896 30.260402439131045 19.98845151277907 10-14 20.148008502400067 29.920499055410232 29.99843164670904 19.93306079548066 15-19 20.02726485951085 29.697914863515418 30.151554585418435 20.123265691555297 20-24 20.171262258869262 29.575773523051563 29.981969059592377 20.270995158486794 25-29 20.34246989614225 29.565364885969895 29.782649004257156 20.309516213630697 30-34 20.476156564956167 29.516455300462933 29.681413612584684 20.32597452199622 35-39 20.513111464943062 29.466215293794907 29.61697194765362 20.40370129360841 40-44 20.57523312119968 29.43086523008187 29.56335922410981 20.430542424608635 45-49 20.589444205446256 29.38510968958633 29.53120431511379 20.494241789853625 50-54 20.56361336469769 29.39021905861063 29.52913187317777 20.51703570351391 55-59 20.598137635894055 29.363193131317722 29.51585785426083 20.522811378527393 60-64 20.570927693932312 29.3687628045524 29.487529816505166 20.572779685010122 65-69 20.58635562520482 29.365149487501974 29.454457689579662 20.59403719771355 70-74 20.637357314629973 29.388247423656438 29.413128872556793 20.5612663891568 75-79 20.62045481624556 29.365736211810972 29.43494498278307 20.578863989160396 80-84 20.642487599845072 29.388959163362205 29.42567755321385 20.542875683578877 85-89 20.600747461607153 29.375022140885854 29.41288617930994 20.611344218197054 90-94 20.588649820302898 29.35336943199829 29.40766207260917 20.650318675089643 95-99 20.610183329517472 29.389838718989953 29.348738831255073 20.65123912023751 100-101 20.691918564613488 29.36236483353018 29.280748649345856 20.66496795251048 >>END_MODULE >>Per base GC content pass #Base %GC 1 38.85914540692056 2 39.077415946245814 3 40.122982496406074 4 40.2541945944349 5 40.05249659788504 6 40.57175227091219 7 40.0871993830812 8 40.002220919459184 9 39.975999077532066 10-14 40.08106929788073 15-19 40.15053055106615 20-24 40.44225741735606 25-29 40.65198610977295 30-34 40.80213108695238 35-39 40.91681275855147 40-44 41.00577554580832 45-49 41.08368599529988 50-54 41.0806490682116 55-59 41.12094901442145 60-64 41.14370737894244 65-69 41.180392822918364 70-74 41.198623703786765 75-79 41.19931880540595 80-84 41.185363283423946 85-89 41.2120916798042 90-94 41.23896849539254 95-99 41.26142244975498 100-101 41.35688651712396 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 288.0 1 302.0 2 375.5 3 541.5 4 700.5 5 794.0 6 991.0 7 1325.5 8 1844.0 9 2401.5 10 3107.5 11 4329.0 12 6050.5 13 8000.5 14 10156.5 15 13032.0 16 16414.5 17 20863.0 18 27138.0 19 35658.5 20 47280.5 21 62279.5 22 81233.5 23 103461.0 24 129182.5 25 159098.5 26 192121.0 27 226706.5 28 262631.5 29 298810.0 30 333840.0 31 367642.5 32 400540.0 33 432843.0 34 462512.0 35 490305.0 36 516033.5 37 535757.5 38 544517.0 39 542930.5 40 532163.0 41 510249.5 42 481994.5 43 452094.0 44 422840.5 45 397231.5 46 377928.0 47 363988.5 48 350862.0 49 336355.5 50 319069.5 51 298837.5 52 277363.0 53 255916.5 54 236588.0 55 219558.0 56 203626.0 57 187444.5 58 168563.5 59 148388.0 60 128049.0 61 107490.0 62 89309.5 63 74366.0 64 61605.5 65 50653.5 66 41710.0 67 34047.0 68 27426.5 69 21938.5 70 17362.5 71 13714.0 72 10901.0 73 8688.5 74 7001.5 75 5693.5 76 4702.0 77 3937.0 78 3270.0 79 2650.5 80 2105.5 81 1628.5 82 1221.5 83 898.5 84 605.5 85 367.0 86 230.0 87 137.5 88 77.5 89 55.0 90 42.5 91 37.5 92 30.0 93 23.0 94 16.5 95 12.0 96 7.0 97 4.0 98 2.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12820628711285392 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 2.4298681477891817 15-19 8.525038294692494E-5 20-24 2.41052806953374E-4 25-29 0.0 30-34 1.7638010264881023E-4 35-39 1.1317723253298658E-4 40-44 1.5139292144022878E-4 45-49 0.0013184412672998566 50-54 1.8372927359251067E-4 55-59 2.5869081721825504E-4 60-64 0.0 65-69 0.0028514783261557658 70-74 0.018106887371089113 75-79 0.015095197118360677 80-84 0.001258178065561513 85-89 0.006812681464810295 90-94 0.007947393458517641 95-99 0.004510921125243322 100-101 0.004460946762826159 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.3606977E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.291103238361368 #Duplication Level Relative count 1 100.0 2 3.7864346492582612 3 0.7337515042438313 4 0.495734869703198 5 0.34184939457513763 6 0.2641079434723805 7 0.19648353052683146 8 0.13791120435352125 9 0.09904047880214269 10++ 0.43982492199231105 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2381715 3.546722 3.939791 25-29 CTGGG 2326120 3.4249766 3.5986097 1 CCAGG 2129190 3.160945 3.3913953 25-29 GGAGG 2140255 3.1578994 3.4083345 70-74 CCTCC 2104045 3.1266918 3.4848785 70-74 CCTGG 2052835 3.0318968 3.2113476 70-74 >>END_MODULE