##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename Undetermined_Undetermined_L003_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8489704 Filtered Sequences 0 Sequence length 101 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.770865509563116 34.0 31.0 34.0 31.0 34.0 2 32.97693794742432 34.0 33.0 34.0 31.0 34.0 3 33.05861606011234 34.0 33.0 34.0 31.0 34.0 4 36.464817265713855 37.0 37.0 37.0 35.0 37.0 5 36.405693414046 37.0 37.0 37.0 35.0 37.0 6 36.388196573166745 37.0 37.0 37.0 35.0 37.0 7 36.39300533917319 37.0 37.0 37.0 35.0 37.0 8 36.367056024568114 37.0 37.0 37.0 35.0 37.0 9 38.03765090043186 39.0 39.0 39.0 37.0 39.0 10-14 38.414417746484446 39.4 38.6 39.4 37.0 39.4 15-19 39.562608119199446 41.0 39.4 41.0 37.0 41.0 20-24 39.54312736934056 41.0 39.4 41.0 37.0 41.0 25-29 39.33058184360728 41.0 39.0 41.0 36.6 41.0 30-34 39.17625283519897 40.0 39.0 41.0 36.0 41.0 35-39 38.91564928529899 40.0 38.6 41.0 35.6 41.0 40-44 38.63009233301891 40.0 38.0 41.0 35.0 41.0 45-49 38.402570077826034 40.0 38.0 41.0 34.4 41.0 50-54 38.17934182393167 40.0 37.4 41.0 34.0 41.0 55-59 37.6382471285218 39.4 36.0 41.0 33.6 41.0 60-64 36.68353282988429 38.2 35.0 40.4 32.4 41.0 65-69 35.005138082552705 36.6 35.0 39.6 30.0 41.0 70-74 34.463296718001004 35.4 35.0 38.8 30.0 40.8 75-79 33.50784373636584 35.0 33.8 36.8 29.4 39.2 80-84 33.38101985652268 35.0 34.0 36.0 30.0 37.8 85-89 32.96965816476052 35.0 34.0 35.4 30.0 36.6 90-94 32.71181718467452 35.0 34.0 35.0 29.4 36.0 95-99 32.491089748240924 35.0 34.0 35.0 29.0 35.0 100-101 32.1287508963799 35.0 33.5 35.0 28.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 3.0 6 2.0 7 2.0 8 17.0 9 55.0 10 404.0 11 2689.0 12 4539.0 13 6425.0 14 3308.0 15 4219.0 16 5328.0 17 7762.0 18 10905.0 19 15096.0 20 19625.0 21 25578.0 22 34797.0 23 54301.0 24 98892.0 25 105877.0 26 32816.0 27 38293.0 28 46183.0 29 56050.0 30 69332.0 31 88627.0 32 117311.0 33 164901.0 34 259186.0 35 487108.0 36 1255213.0 37 2494199.0 38 2393318.0 39 587172.0 40 171.0 >>END_MODULE >>Per base sequence content pass #Base G A T C 1 27.743798350296235 27.42465120119662 21.526923560129156 23.304626888377992 2 25.683117679511092 23.762742961187037 23.178149116075822 27.375990243226045 3 25.707939876349045 25.308196846438936 23.642885547010824 25.340977730201192 4 27.147224449757022 23.99970599681685 21.66478360140707 27.188285952019058 5 25.505965814591413 25.246204107940628 23.036716003290575 26.211114074177377 6 25.870807745476164 26.756869261872968 25.324981883938474 22.04734110871239 7 28.84819070252626 22.104975626947653 27.29429671517405 21.752536955352035 8 27.527331930536093 22.66619660709019 31.99338869765071 17.81308276472301 9 29.096621036493147 24.246840643678507 29.237556456620865 17.41898186320748 10-14 28.39309018986246 24.97333593601548 28.941962119855397 17.691611754266663 15-19 24.809441742447234 25.992144916717308 29.92326737314892 19.275145967686534 20-24 22.588118100978527 25.004930175730994 31.414241080280835 20.992710643009644 25-29 22.91014798767868 25.444924791435884 29.741953539253952 21.902973681631487 30-34 23.01303071345366 25.93448767811149 30.545433104117343 20.50704850431751 35-39 23.209905298278237 26.589301417600208 29.18701671512709 21.013776568994462 40-44 23.312503687413695 26.974992946382066 29.149351863088057 20.56315150311618 45-49 22.362365980343775 25.972221494122966 29.81912172527126 21.846290800262004 50-54 22.457146064907636 26.52423572270272 30.25356503025526 20.765053182134384 55-59 22.167958553330465 26.63523112933848 29.893521218172513 21.303289099158537 60-64 21.582070724487675 28.214580795470923 29.414829377161595 20.78851910287981 65-69 22.504483674184492 27.57213501464423 28.934483534102146 20.988897777069134 70-74 22.942313988046298 26.386137269040084 29.153715935645852 21.517832807267766 75-79 22.096934280113427 27.45050186602634 28.8488056664493 21.603758187410936 80-84 23.086697360076943 27.314115723072085 28.257988807537345 21.34119810931363 85-89 22.070636696205334 27.533076802310042 28.769336085775194 21.626950415709434 90-94 24.132472889487982 27.38796010554073 28.54528932522735 19.934277679743932 95-99 22.755790419793982 26.345498138355172 29.155729887079712 21.742981554771138 100-101 23.88924183637363 27.827548370070975 28.379994296140215 19.903215497415182 >>END_MODULE >>Per base GC content warn #Base %GC 1 51.04842523867422 2 53.059107922737134 3 51.04891760655023 4 54.33551040177608 5 51.717079888768794 6 47.91814885418856 7 50.600727657878295 8 45.340414695259106 9 46.515602899700625 10-14 46.08470194412912 15-19 44.084587710133775 20-24 43.58082874398817 25-29 44.81312166931017 30-34 43.520079217771176 35-39 44.2236818672727 40-44 43.875655190529876 45-49 44.20865678060578 50-54 43.22219924704202 55-59 43.471247652489005 60-64 42.37058982736748 65-69 43.493381451253626 70-74 44.46014679531407 75-79 43.70069246752436 80-84 44.42789546939057 85-89 43.697587111914764 90-94 44.066750569231914 95-99 44.49877197456512 100-101 43.79245733378881 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 798.0 1 500.0 2 201.5 3 247.0 4 308.5 5 381.0 6 583.5 7 797.5 8 1180.0 9 1566.0 10 1922.0 11 2356.0 12 3524.0 13 5140.0 14 6383.5 15 7145.0 16 8264.0 17 10549.0 18 11560.5 19 13288.5 20 15660.0 21 18496.0 22 20709.5 23 23701.0 24 28436.5 25 30616.5 26 36019.5 27 50777.5 28 59370.0 29 55660.5 30 59761.5 31 69986.5 32 76050.0 33 84707.5 34 101271.5 35 114749.5 36 163605.5 37 211381.0 38 227517.5 39 260131.5 40 299110.0 41 342616.0 42 473534.0 43 614008.5 44 605323.5 45 529552.0 46 498819.0 47 501885.0 48 468382.0 49 389600.5 50 350831.5 51 317800.0 52 253984.0 53 218915.0 54 176442.0 55 129466.5 56 103765.5 57 85758.0 58 71472.5 59 60349.0 60 49187.5 61 38231.0 62 30485.0 63 26343.0 64 20644.0 65 16694.0 66 12736.0 67 6828.5 68 4370.5 69 2785.0 70 1788.0 71 928.0 72 636.5 73 488.5 74 336.5 75 222.5 76 116.5 77 68.5 78 43.0 79 32.5 80 23.5 81 19.0 82 16.0 83 9.5 84 8.0 85 7.5 86 4.5 87 3.5 88 4.0 89 4.5 90 3.0 91 2.5 92 2.0 93 1.0 94 1.0 95 1.5 96 2.5 97 3.5 98 5.0 99 9.0 100 47.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.430521488146112 2 0.2705748044925948 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 4.7115894735552624E-6 15-19 1.97886757889321E-4 20-24 0.0017503554894257795 25-29 0.12270156886506291 30-34 0.036790446404256265 35-39 0.2320410699831231 40-44 0.25571209549826474 45-49 0.23749709059350008 50-54 0.28894293605525 55-59 0.2981658724497344 60-64 0.946982368289872 65-69 3.6373682757372934 70-74 3.6535855667052703 75-79 3.856273434268144 80-84 3.8516819903261648 85-89 3.6356179202478676 90-94 3.4724602883681217 95-99 3.5774769061441956 100-101 3.7462377958053663 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 8489704.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 78.60129585225243 #Duplication Level Relative count 1 100.0 2 21.51651265032091 3 10.499814035991188 4 6.980802792321117 5 4.74828102499547 6 3.7259558073222134 7 2.951582601398068 8 2.403227190799073 9 2.056094374350318 10++ 35.85004625258681 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ACCCAATTGGTCAAGGAAGCTTCTCTGACGGTATGCCTTTAGGAATCTCT 127978 1.507449494116638 No Hit ACATGGGTCGTGAGTGGGAACTTAGCTACCGTTTAGGTATGCGTCCTTGG 55608 0.6550051686136524 No Hit GGTGTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTTCCTTAGTAAC 50947 0.6001033722730498 No Hit CTGGTACTTTCAACTTCATGATTGTGTTCCAAGCTGAACACAACATCCTT 49476 0.5827765019840503 No Hit GCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTCTCTGA 46918 0.5526458873006644 No Hit CTGACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTCATGATTGTG 41299 0.4864598341708969 No Hit GTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTTCCTTAGTAACTTC 33395 0.3933588261734449 No Hit ATGGTTCGGTGTTTTAATGATTCCTACTCTATTAACTGCAACTTCTGTAT 32976 0.3884234361998958 No Hit GTAGCTGGTGTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTTCCTT 32327 0.3807788822790524 No Hit GGTACTTTCAACTTCATGATTGTGTTCCAAGCTGAACACAACATCCTTAT 29831 0.3513785639640675 No Hit GCTTGGCCTGTAGTAGGTATCTGGTTCACTGCATTAGGTATCAGCACTAT 29026 0.34189649014853757 No Hit TGGTGTAGCTGGTGTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTT 24421 0.2876543163342326 No Hit GCTACTTTAGAAAGACGCGAAAGCGCAAGCCTATGGGGTCGCTTCTGCGA 24147 0.2844268775448473 No Hit CCTGTTGCGGCTGCTACTGCTGTTTTCTTGATCTACCCAATTGGTCAAGG 23353 0.27507437243984006 No Hit TGCTACATGGGTCGTGAGTGGGAACTTAGCTACCGTTTAGGTATGCGTCC 23287 0.27429696017670346 No Hit GGTGTAGCTGGTGTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTTC 21308 0.25098637125628875 No Hit TGGCCTGTAGTAGGTATCTGGTTCACTGCATTAGGTATCAGCACTATGGC 20991 0.24725243659849627 No Hit AAGCCTATGGGGTCGCTTCTGCGACTGGGTTACCAGCACTGAAAACCGCC 20151 0.2373580987040302 No Hit GACTGCTACTTTAGAAAGACGCGAAAGCGCAAGCCTATGGGGTCGCTTCT 19651 0.23146861186208612 No Hit AGCCTATGGGGTCGCTTCTGCGACTGGGTTACCAGCACTGAAAACCGCCT 18398 0.21670955783617427 No Hit GACGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTCATGATTGTGTT 17779 0.20941837312584752 No Hit CCTGTAGATATTGATGGTATCCGTGAGCCTGTTTCTGGTTCTCTTCTTTA 16893 0.19898220244192258 No Hit GATGGTTCGGTGTTTTAATGATTCCTACTCTATTAACTGCAACTTCTGTA 16065 0.1892292122316632 No Hit CAAGCCTATGGGGTCGCTTCTGCGACTGGGTTACCAGCACTGAAAACCGC 15822 0.18636692162647836 No Hit GGCCTGTAGTAGGTATCTGGTTCACTGCATTAGGTATCAGCACTATGGCT 15533 0.1829627982318347 No Hit ATGCATGGTTCCTTAGTAACTTCAAGTTTAATCCGTGAAACTACTGAGAA 15171 0.17869880975826719 No Hit GCAACTTCTGTATTTATTATTGCTTTCATTGCAGCTCCTCCTGTAGATAT 15073 0.17754447033724616 No Hit AGCTGGTGTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTTCCTTAG 14347 0.16899293544274335 No Hit GCCCTAGGTAACTTCTGTATTATAGTTGCTCCAGTTTTAAACTGAAAAAA 13944 0.16424600904813644 No Hit CCACATGCTTGGTGTAGCTGGTGTATTCGGTGGCTCTCTATTCAGTGCTA 13716 0.16156040304820993 No Hit GGCTCTCTATTCAGTGCTATGCATGGTTCCTTAGTAACTTCAAGTTTAAT 13614 0.16035894773245332 No Hit GAACACAACATCCTTATGCACCCATTCCACATGCTTGGTGTAGCTGGTGT 13437 0.15827406939040511 No Hit GCAGCTATCGGTTTGCACTTCTACCCAATTTGGGAAGCTGCTTCCGTTGA 12645 0.1489451222327657 No Hit CTATTCAGTGCTATGCATGGTTCCTTAGTAACTTCAAGTTTAATCCGTGA 12582 0.14820304689068076 No Hit GCAAGCCTATGGGGTCGCTTCTGCGACTGGGTTACCAGCACTGAAAACCG 12435 0.1464715377591492 No Hit ACATGCTTGGTGTAGCTGGTGTATTCGGTGGCTCTCTATTCAGTGCTATG 12123 0.1427964979697761 No Hit CCTCCTGTAGATATTGATGGTATCCGTGAGCCTGTTTCTGGTTCTCTTCT 12011 0.14147725291718063 No Hit CTGGTGTATTCGGTGGCTCTCTATTCAGTGCTATGCATGGTTCCTTAGTA 11566 0.1362356096278504 No Hit GCTCACGGTTACTTTGGTAGATTAATTTTCCAATACGCTAGCTTTAACAA 11123 0.13101752428588795 No Hit TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCATTAGGTATCAGC 11028 0.12989852178591857 No Hit TTACATCGGATGGTTCGGTGTTTTAATGATTCCTACTCTATTAACTGCAA 10242 0.12064024847038247 No Hit TGACTGCTACTTTAGAAAGACGCGAAAGCGCAAGCCTATGGGGTCGCTTC 9877 0.11634092307576331 No Hit ACTTTAGAAAGACGCGAAAGCGCAAGCCTATGGGGTCGCTTCTGCGACTG 9590 0.11296035762848741 No Hit GCGACTGGGTTACCAGCACTGAAAACCGCCTTTACATCGGATGGTTCGGT 9512 0.11204159768114412 No Hit GGGTTACCAGCACTGAAAACCGCCTTTACATCGGATGGTTCGGTGTTTTA 9404 0.1107694685232842 No Hit GGTTCGGTGTTTTAATGATTCCTACTCTATTAACTGCAACTTCTGTATTT 9284 0.10935599168121764 No Hit TACATCGGATGGTTCGGTGTTTTAATGATTCCTACTCTATTAACTGCAAC 9088 0.10704731283917555 No Hit CCACGTAGTTGGTTAGCTACTTCTCACTTTGTATTAGGATTTTTCTTCTT 9017 0.10621100570761949 No Hit GGTATCCGTGAGCCTGTTTCTGGTTCTCTTCTTTACGGAAACAACATCAT 8949 0.10541003549711508 No Hit >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CTGCT 2324100 3.2683954 9.36868 5 ACTTC 2369730 2.9659436 5.7616777 60-64 CTTCT 2325345 2.6460304 5.923229 40-44 CTGGT 2100575 2.644598 10.260456 1 AGCTG 1814110 2.5121276 6.4879065 3 GCTGC 1401715 2.4361942 7.4672194 3 TCTCT 2135460 2.4299586 7.6812963 20-24 GGAAG 1772610 2.417072 5.192245 15-19 CTACT 1920495 2.403683 10.671601 2 TCAAC 1739390 2.394515 6.115436 55-59 CAAGC 1368690 2.3286173 6.3734655 75-79 CTTCA 1850570 2.3161652 5.706876 60-64 CAACT 1681445 2.314746 6.135925 9 TTCAA 2275070 2.2687397 6.0990825 55-59 TGGTG 1999640 2.2537978 7.2376785 6 CCAGC 1031280 2.2021337 5.5043883 1 GCTGG 1408790 2.1919978 8.112978 4 GCAGC 1144005 2.1869392 6.148239 1 ACTGC 1402700 2.1697075 8.716858 4 ATGGT 2123640 2.1302385 6.1844444 1 GGTGG 1529135 2.130009 7.675059 7 GAAGC 1395130 2.1249533 5.7701616 15-19 AGGAA 1748935 2.1224346 5.1045537 40-44 TCCTT 1857090 2.113199 5.660529 40-44 CATGG 1516890 2.100546 10.859283 2 CTGAA 1698970 2.0938618 5.017644 80-84 GGTTC 1662310 2.0928278 5.10286 3 GGTGT 1843910 2.0782743 9.063792 1 TGCTG 1641055 2.0660682 7.384344 6 CAACA 1363510 2.0645983 5.557697 85-89 GCGGC 959665 2.0613143 6.8975563 7 TATGC 1834285 2.055287 6.0671296 30-34 GCTAC 1324385 2.0485692 13.318726 1 CGGTG 1315790 2.0472953 10.3009815 9 CCAAG 1173945 1.9972881 5.956003 75-79 GCTTC 1351860 1.9011288 7.1433396 15-19 CTTGG 1506405 1.8965454 6.0646505 2 CGTGA 1350550 1.870203 9.106981 9 GGTAT 1863735 1.869526 5.0141087 6 CTGTT 1820480 1.8545349 6.0780396 8 ACAAC 1222270 1.8507355 5.4054904 85-89 CAAGG 1212410 1.8466485 5.3171616 10-14 TTGGT 2019765 1.8420084 15.0154295 7 ACCCA 957800 1.8202296 27.937819 1 CTCTG 1283805 1.8054224 6.573842 45-49 TGGCT 1424400 1.7933019 5.6667747 9 GTGGC 1152495 1.7932173 6.6219 8 CTCCT 1120105 1.7595308 6.620964 70-74 TTTCA 1917380 1.7383671 5.332835 8 CCTGT 1213215 1.7061512 6.7003145 1 CATCC 981580 1.6959788 5.7808504 90-94 CTTTC 1480060 1.6841732 6.503199 7 GCTTG 1336065 1.6820894 6.1472025 1 GCTCC 861935 1.6733433 5.1966953 70-74 TACTG 1491295 1.6709721 6.387582 3 TGGTA 1658180 1.6633323 7.7444305 2 CCGCC 608325 1.630335 5.839612 45-49 TTCGG 1289515 1.6234834 8.3872595 7 TCGGT 1280095 1.6116238 9.960696 8 GACGG 941305 1.6109456 8.4884205 3 CCTTA 1251330 1.5661589 6.2503505 95-97 GTAGC 1120635 1.5518233 5.590562 1 CCAAT 1124545 1.5480944 20.746174 3 TGTAG 1542995 1.5477895 5.1212907 3 TATTC 1687270 1.5297409 5.1710896 5 GGTCA 1103730 1.5284138 19.177702 9 TGACG 1103085 1.5275205 6.9196053 2 ATGCC 983700 1.5215949 7.1563225 9 ACGGT 1095955 1.5176471 6.8710246 4 TGGTC 1200265 1.5111188 17.582256 8 GCTGT 1185925 1.4930649 7.217391 7 AGCCT 964545 1.4919659 5.471986 2 CTGTA 1327540 1.4874874 5.8808947 8 CCCAA 769105 1.4616284 28.320747 2 GCAAC 844965 1.4375792 5.070563 1 GGCTG 897775 1.3968874 6.0771265 9 TACTT 1536420 1.3929747 5.728981 5 GGTCG 893125 1.3896521 9.907616 6 CTGAC 878705 1.359188 7.697427 1 GGTAC 979925 1.3569721 8.375093 3 ACTTT 1447950 1.3127646 5.7588224 4 GTGTA 1306760 1.3108203 7.9670568 2 GTATT 1599830 1.2985206 5.189238 4 AAGCC 741930 1.2622806 5.439167 1 ATGGG 1003055 1.2434964 9.640226 3 GCCTG 713540 1.2401395 6.181369 6 GTATG 1226200 1.23001 5.062915 7 GGGTC 784215 1.2201943 9.7280035 5 CGGTA 853930 1.182498 6.5414114 5 TGGCC 651925 1.133052 8.255664 1 ATTGG 1127850 1.1313543 14.339422 6 TGGGT 997085 1.1238163 7.5941324 4 ACATG 895855 1.1040788 9.573344 1 CAATT 1103535 1.1004646 15.008711 4 GTACT 942855 1.0564541 6.583737 4 TCGTG 831630 1.047012 7.893609 8 TGGGG 703520 0.9799683 5.071745 8 GGCCT 541840 0.94172317 6.1042676 5 ATTCG 825410 0.9248587 6.1652374 6 AATTG 997870 0.890852 12.3173275 5 GCCTA 498790 0.77153236 5.013632 3 GTCGT 609200 0.7669753 7.766893 7 >>END_MODULE