##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename B80b_GATCAG_L006_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 400514 Filtered Sequences 0 Sequence length 101 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.061086503842564 33.0 30.0 34.0 16.0 34.0 2 29.73058369994557 33.0 30.0 34.0 16.0 34.0 3 30.433200836924552 34.0 31.0 34.0 23.0 34.0 4 33.78895868808581 37.0 35.0 37.0 26.0 37.0 5 33.22444408934519 37.0 35.0 37.0 19.0 37.0 6 32.75095502279571 37.0 33.0 37.0 17.0 37.0 7 34.09366713772802 36.0 35.0 37.0 28.0 37.0 8 34.78836195488797 37.0 35.0 37.0 32.0 37.0 9 36.785665419935384 39.0 37.0 39.0 33.0 39.0 10-14 37.22677409528755 39.2 37.2 39.4 33.0 39.4 15-19 38.331259831117016 40.0 38.2 41.0 33.0 41.0 20-24 38.2678333341656 40.0 38.0 41.0 33.0 41.0 25-29 38.11413583545145 40.0 38.0 41.0 33.0 41.0 30-34 37.87644127296424 40.0 38.0 41.0 32.0 41.0 35-39 37.64779058909302 40.0 38.0 41.0 31.8 41.0 40-44 37.52942818478255 40.0 37.6 41.0 31.2 41.0 45-49 37.330653610111014 40.0 37.0 41.0 31.0 41.0 50-54 36.68440853503248 39.2 36.0 40.2 30.4 40.6 55-59 37.16916612153383 39.8 36.2 41.0 31.0 41.0 60-64 36.5753971147076 38.8 35.0 40.6 31.0 41.0 65-69 35.6864509105799 37.0 35.0 39.6 30.0 41.0 70-74 34.661915438661325 35.6 34.0 38.0 29.0 39.6 75-79 33.74339573647862 35.0 33.8 36.4 28.8 38.2 80-84 33.02185142092411 35.0 33.0 35.4 27.8 36.6 85-89 32.57568873996914 35.0 33.0 35.0 27.0 35.8 90-94 32.301281353460794 35.0 33.0 35.0 26.6 35.0 95-99 32.04652821124854 35.0 32.2 35.0 25.2 35.0 100-101 31.404474000908834 34.5 31.0 35.0 24.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 1.0 6 19.0 7 285.0 8 794.0 9 695.0 10 535.0 11 523.0 12 539.0 13 664.0 14 810.0 15 896.0 16 931.0 17 1022.0 18 1101.0 19 1219.0 20 1356.0 21 1439.0 22 1696.0 23 1986.0 24 2201.0 25 2522.0 26 3178.0 27 4043.0 28 4969.0 29 5130.0 30 7112.0 31 7858.0 32 8186.0 33 11471.0 34 17228.0 35 28466.0 36 53490.0 37 111830.0 38 108121.0 39 8193.0 40 5.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 14.910896232069366 22.368342190434333 32.61078035721421 30.109981220282094 2 28.433299288555713 31.585978878919622 18.174167755017443 21.806554077507222 3 16.162771531464934 50.474009400270724 14.795686464509233 18.56753260375511 4 21.30561708524894 19.55054327875157 12.243312964021987 46.9005266719775 5 29.903132280998797 14.395307197279013 37.77566345272611 17.925897068996086 6 35.51347261654169 35.66728842211452 27.89259861316074 0.9266403481830507 7 0.7623028387228868 1.205751853322247 97.3487941233018 0.6831511846530686 8 25.416665626303054 27.046624103310602 13.525559237055587 34.011151033330755 9 26.309310681478266 34.29014449546439 22.52501267175534 16.875532151302007 10-14 19.36122630805127 33.7923398695944 26.43175480231406 20.41467902004027 15-19 21.10290801258086 31.336219318921387 25.46265425762791 22.098218410869848 20-24 20.732069715883352 31.1134873374384 26.41595092698631 21.738492019691936 25-29 21.148895603838607 31.355003278406908 25.587803627171475 21.908297490583006 30-34 21.213437872538282 30.814244140895198 26.317240428684656 21.655077557881867 35-39 21.578393840394796 30.32855489181839 25.889028827455746 22.204022440331073 40-44 21.7773322885312 29.614447036472686 26.418511176935645 22.189709498060473 45-49 21.687428737809576 29.783063284071382 25.874336821507782 22.65517115661126 50-54 22.173375806740005 29.041141867371493 26.334111479706763 22.45137084618174 55-59 22.336695954116383 29.183376129871053 25.960974152755917 22.518953763256647 60-64 21.905500572086662 29.240845239944285 26.26524544790316 22.588408740065894 65-69 22.283763361058476 29.123686368598907 26.064564590061103 22.52798568028152 70-74 22.39292437069641 28.91277975360756 26.23754340735162 22.45675246834441 75-79 22.713014899430096 28.749356922016496 26.146526879411013 22.391101299142395 80-84 22.563040299938113 28.809003737737964 25.84099104251571 22.786964919808213 85-89 22.252772637483112 29.031168915493556 26.27054348939018 22.44551495763315 90-94 22.374477353221803 29.14877886733639 26.313273354880284 22.163470424561527 95-99 22.783134534203626 29.59044165725495 25.665592873302206 21.96083093523922 100-101 22.9923611882929 29.03984744854698 25.92987578345586 22.03791557970426 >>END_MODULE >>Per base GC content fail #Base %GC 1 45.020877452351456 2 50.23985336606294 3 34.730304135220045 4 68.20614375722644 5 47.829029349994876 6 36.44011296472474 7 1.4454540233759554 8 59.427816659633805 9 43.18484283278027 10-14 39.77590532809154 15-19 43.2011264234507 20-24 42.47056173557529 25-29 43.05719309442161 30-34 42.86851543042015 35-39 43.78241628072587 40-44 43.96704178659167 45-49 44.342599894420836 50-54 44.62474665292174 55-59 44.85564971737303 60-64 44.49390931215256 65-69 44.81174904134 70-74 44.84967683904082 75-79 45.10411619857249 80-84 45.35000521974632 85-89 44.69828759511626 90-94 44.53794777778333 95-99 44.74396546944284 100-101 45.030276767997165 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 1.0 2 4.0 3 13.0 4 15.0 5 10.5 6 8.0 7 8.0 8 13.0 9 12.0 10 10.0 11 16.5 12 21.0 13 18.5 14 17.5 15 22.5 16 31.0 17 35.5 18 35.0 19 48.0 20 76.0 21 119.5 22 170.0 23 240.0 24 322.5 25 430.0 26 550.5 27 775.0 28 1166.5 29 1607.0 30 1970.0 31 2606.5 32 3647.5 33 4880.5 34 6248.5 35 7570.0 36 9065.0 37 11266.5 38 14066.5 39 17004.5 40 19522.5 41 21760.5 42 24330.5 43 26683.0 44 27711.5 45 26964.5 46 26180.5 47 25172.5 48 23250.0 49 19349.0 50 14208.5 51 10887.0 52 9594.5 53 8773.5 54 7338.5 55 5930.0 56 4348.0 57 3284.5 58 2716.5 59 2060.0 60 1553.0 61 1109.0 62 761.5 63 547.0 64 450.5 65 356.0 66 309.5 67 286.5 68 231.5 69 168.5 70 142.5 71 118.5 72 72.0 73 44.0 74 45.0 75 36.0 76 19.5 77 17.0 78 12.0 79 7.0 80 5.5 81 4.5 82 3.5 83 3.0 84 4.5 85 3.0 86 2.0 87 1.5 88 1.0 89 2.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.020473691306670927 2 0.015230428898864957 3 0.024967916227647474 4 0.018725937170735604 5 0.017727220521629703 6 0.008738770679676615 7 0.00424454575870007 8 0.003245829109594172 9 0.00424454575870007 10-14 0.010087038155969579 15-19 0.02401913541099687 20-24 0.01642888887779204 25-29 0.003645315769236531 30-34 0.01293338060592139 35-39 0.005193326575350674 40-44 0.0138322255901167 45-49 0.01403196891993788 50-54 0.0187758730031909 55-59 0.02302041876189097 60-64 0.012533893946279032 65-69 0.014781006406767305 70-74 0.015829658888328497 75-79 0.023969199578541572 80-84 0.027814258677599287 85-89 0.020723370468947403 90-94 0.03695251601691826 95-99 0.0316093819442017 100-101 0.031085055703421103 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 400514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Duplicate Percentage 58.21676813192081 #Duplication Level Relative count 1 100.0 2 30.60590763770976 3 11.91623453107552 4 4.794792957337127 5 2.09566640662047 6 1.0876049745307697 7 0.6026953023419455 8 0.3931286616798984 9 0.2493384118825815 10++ 1.222981965031435 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content fail #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CAGTG 107580 3.3610375 214.94926 2 TGACC 103640 3.203343 173.98749 1 GCTTT 105165 3.026468 157.30902 3 GAAGA 137870 2.864985 5.0585837 9 GACCA 102730 2.8384464 157.45235 2 AAGAA 177590 2.7164946 5.526107 9 TGGTG 76345 2.6969988 6.9889393 7 CTCAG 86925 2.6867096 200.32697 1 TCAGA 113895 2.6192937 148.49788 2 ACAGT 112055 2.5769787 162.04843 1 AGTGT 98260 2.55514 185.84587 3 CAGAT 108895 2.5043068 150.50569 3 CGATG 79975 2.4985962 133.19566 1 TGTTG 84685 2.463412 27.791899 4 CTTTG 84260 2.4248576 42.749718 4 AGCTT 90420 2.3261445 136.75638 2 ACCAT 101835 2.3169193 131.16393 3 TGCTG 66175 2.3127487 9.083437 7 CAAGA 110530 2.2723076 5.5129585 8 TGAAG 95250 2.2141664 7.7888665 7 GATCA 96060 2.2091343 113.538734 1 TTGGT 73640 2.1421227 5.0780253 6 TTTGG 73305 2.1323779 11.328091 5 GTGTC 60755 2.123325 86.052414 4 ATCAG 89395 2.0558565 113.43976 2 TAGCT 78980 2.0318391 136.9044 1 GATGT 77080 2.004378 101.21568 2 TCAAG 86485 1.9889338 14.195767 7 CCATC 64080 1.9594439 61.42453 4 TCAGT 75115 1.9324081 126.88646 3 TTGAA 100370 1.9212309 6.7106547 7 TCCAA 83180 1.8924862 6.575231 7 TGCCA 61090 1.8881923 10.401274 7 CAACA 92145 1.874101 5.148306 8 CTTTC 65065 1.85245 55.63112 4 GTGGT 52100 1.8405088 7.55441 6 GTTGC 52320 1.8285306 8.627061 5 TGGTT 62045 1.8048345 5.2330565 7 ATGTT 83235 1.7822733 83.27204 3 AGATC 77430 1.780692 52.654434 4 TGGCC 42400 1.7803451 5.802754 7 TTGCC 50480 1.7453722 6.3878613 6 TTCTT 73035 1.7307179 6.871606 6 TGTCG 48585 1.6979961 19.93207 5 GTCAA 73340 1.6866326 20.496838 6 ATGGT 64750 1.6837504 10.241387 3 TTGCT 58160 1.6737448 5.9308314 6 TTGGC 47740 1.6684641 5.016351 6 GTTGA 63830 1.6598269 7.894468 5 TTTGA 77225 1.6535839 9.958583 5 TGTTC 57035 1.6413692 39.414043 4 GTTGG 46390 1.6387948 7.7608447 5 TCAAA 96610 1.6354579 15.924652 7 GTGTT 55795 1.6230274 27.227596 4 CCATG 52380 1.6189802 45.749043 4 TGTCT 55865 1.6076988 18.617926 5 TCTTC 55685 1.5853943 8.959726 7 CAAAA 104390 1.5797325 5.738575 8 GTTCT 54890 1.5796399 9.99283 5 TTCTG 54815 1.5774814 5.205177 6 TTTTG 65720 1.574195 8.096631 5 TTCAA 82555 1.5633397 13.76491 6 TTGTT 65235 1.5625778 5.7146273 6 CCATT 61300 1.5601519 18.909786 4 TGCTT 53480 1.5390625 5.232956 7 ATCAA 90550 1.5328714 15.92505 6 AGATG 65725 1.5278329 37.981113 4 TCAAC 67130 1.5273215 11.804525 7 TGTCC 44145 1.5263363 11.888458 5 TGGCT 43600 1.5237755 7.710753 7 TTTCT 63485 1.5044105 13.078204 5 GATGA 64635 1.5024949 11.341064 5 TGGAA 63295 1.4713457 7.4619827 7 ATGTC 56970 1.4656099 5.2893195 6 TCTTT 61410 1.4552388 8.49162 7 TGTCA 55915 1.4384692 26.686623 5 TTGGA 55190 1.4351535 5.2960124 6 GTCGC 34150 1.4339336 11.66688 6 CATTG 55705 1.4330667 8.5337305 5 TCTGC 41230 1.4255487 5.331468 7 GTGCT 40665 1.4212002 9.744602 6 TCCCA 46360 1.4176003 6.331246 7 GATGG 44425 1.4029266 13.247509 5 CATCA 61100 1.3901289 19.055344 5 TGAAA 80895 1.3842186 9.350995 7 CTTTT 57945 1.3731284 17.158386 4 AAGTT 71395 1.3666064 5.5797524 2 TTTCA 64260 1.3612671 17.834581 5 GTTCC 39265 1.3576077 6.4388833 5 TCTTG 46550 1.3396288 5.135273 7 GTTGT 46015 1.3385359 6.235388 5 TTTCC 46985 1.3376988 8.436279 5 TGTGG 37710 1.3321611 15.624482 5 GTCAC 43040 1.3302962 11.150922 6 TGTTT 55520 1.3298739 12.580875 4 GTTTG 45570 1.3255912 6.630389 5 GTGTG 37360 1.3197967 65.44628 4 TCGGT 37705 1.3177512 7.761593 7 GATTG 50630 1.3165756 10.277941 5 CATGG 42065 1.3142039 11.924143 5 CATCT 51445 1.3093318 13.848732 5 TTTGC 45430 1.3073972 11.514084 5 AGATT 66130 1.2658265 17.118196 4 TCGCT 36455 1.2604506 8.785186 7 GTCCA 40745 1.2593615 7.0742416 6 TTCTC 44200 1.2584078 6.833861 6 ATTGA 65410 1.2520446 5.0493603 6 TTGCA 48635 1.2511837 5.0897226 6 GATCG 39960 1.2484388 15.575624 5 AGTTG 47875 1.244935 6.3937616 5 ATGGC 39725 1.2410969 5.8932266 6 TCTGG 35485 1.2401644 5.829668 7 TGCAA 53345 1.2267988 6.735463 7 GCCAT 39535 1.2219623 5.4706836 8 TGAAC 52870 1.2158748 5.0069914 7 TCTCT 42665 1.2147051 6.1710286 7 CCCAG 32535 1.2081774 6.483982 1 CAGTA 52450 1.206216 31.64174 4 CTTTA 56335 1.1933858 31.509228 4 TCTCC 34875 1.1929361 5.755504 7 GTGCC 28095 1.1796886 10.70991 6 ATGAA 68785 1.1770008 7.6502514 6 CAGTC 38065 1.176527 51.685028 4 GTCGT 33580 1.1735867 7.575369 6 ATCTC 45660 1.1620969 7.182758 6 GTCGA 36790 1.1494011 10.710828 6 CGCTT 33060 1.1430666 6.640928 2 TTTGT 47635 1.141004 9.281505 5 TGTTA 53020 1.1352932 22.93958 4 GCCTT 32735 1.1318296 5.114856 3 GATGC 36000 1.1247196 12.151411 5 TCACC 36455 1.1147242 5.085755 7 TCGCC 26505 1.1010332 7.654329 7 GTGGA 34660 1.0945512 8.391698 6 TCTAC 42955 1.0932517 5.282034 7 GTGGC 25685 1.0901434 7.779607 6 GTTCA 42235 1.0865375 15.008885 5 GTCTC 31310 1.0825595 10.897926 6 GTGAA 46535 1.0817454 10.877633 6 TCGTT 37360 1.0751566 5.58182 7 ATCGG 34070 1.0644222 5.8629274 6 AGTTT 49705 1.0643107 10.281781 3 AAAGT 61975 1.060473 10.581631 1 ATGCT 41140 1.0583674 6.848671 6 TCACT 41575 1.0581292 5.6152463 7 CAGTT 41060 1.0563093 15.782804 4 GTGTA 40620 1.0562772 49.940693 4 ATGGA 44620 1.0372294 6.098237 6 GTCTT 35985 1.0355865 9.517241 6 GTCTG 29590 1.0341402 7.0161138 6 ATCTG 39790 1.0236373 6.4120526 6 GTCAT 39605 1.018878 7.0233183 6 TCTCA 39955 1.0168984 6.9357543 7 CATCG 32400 1.0014312 13.595463 5 ATCTT 47095 0.9976482 7.9301553 6 TCACA 43580 0.991519 8.329361 7 CATCC 32425 0.99149466 8.141293 5 TGGAT 37910 0.98580664 5.2328343 7 ATGCC 31660 0.97855884 7.1192045 6 TATTT 55430 0.9773354 5.215303 7 TTTAC 45920 0.9727573 5.835278 5 TAAGA 56580 0.96815735 5.949125 7 AGTCA 41845 0.962328 15.558378 5 TTCAC 37725 0.96014255 6.997636 6 TTCAG 37150 0.95572084 6.1750317 6 AGATA 55675 0.95267165 30.115591 4 CATGA 41305 0.94990945 9.725382 5 TTTAT 53755 0.94780195 5.6093583 5 TCAAT 49615 0.93955654 9.274323 7 TCGAA 40380 0.9286367 8.43048 7 TAGAA 54255 0.9283736 10.388151 7 GATCT 36020 0.92665035 15.02136 5 TCAGC 29915 0.9246237 8.587793 7 GTCCC 22155 0.92033166 5.9423256 6 GTAGA 39540 0.9191406 9.998404 6 TTTCG 31805 0.9152932 12.965556 5 CCATA 39640 0.9018773 35.827583 4 GTCAG 28690 0.8963392 9.907894 6 TTTAG 41580 0.89033365 9.636668 5 TCTCG 25750 0.8903195 6.3541703 7 ATATT 55935 0.8816368 5.480081 6 TATTC 41595 0.8811376 5.885836 7 TGTGC 25165 0.87949103 17.338867 5 ATCGA 38180 0.87804234 7.672374 6 GTCGG 20505 0.8702897 8.129483 6 GTAAG 37415 0.86974317 6.030604 6 CATGC 28095 0.86837065 12.0065775 5 ATCAT 45830 0.8678802 5.022952 6 TTCGG 24650 0.8614922 5.3891883 6 GTGGG 20060 0.86059874 6.344997 6 GTTCG 24040 0.8401734 10.694843 5 TTTAA 53075 0.83655804 9.577844 5 ATGCA 36140 0.8311276 5.16324 6 GTAAC 35960 0.82698804 6.111135 6 TCTAA 43115 0.8164664 5.142199 7 ATCAC 35215 0.80120105 8.46196 6 TGTAG 30595 0.7955883 14.918778 5 TAAAG 46390 0.79379326 5.0364285 7 TTCGA 30715 0.79017395 6.387103 6 TCGAG 25225 0.7880848 5.4386005 7 GATAT 41115 0.7870022 6.8693867 5 CATGT 30570 0.78644377 9.082684 5 AGTCT 30515 0.78502876 10.367733 5 TTCGC 22700 0.7848643 6.9076085 6 TTAGA 40505 0.7753259 6.5159025 6 TCGAT 29965 0.77087945 5.5012546 7 GTATT 35915 0.7690316 6.5517826 6 TAAAA 60560 0.7627929 8.575092 7 AGTCC 24665 0.7623548 7.0600457 5 GATCC 24650 0.7618912 9.053647 5 GTCTA 29550 0.76020324 7.035794 6 ATCGT 29465 0.7580164 5.651089 6 GTTAA 39410 0.75436604 7.6120243 5 ATCGC 24270 0.75014603 7.7636795 6 AAGTG 32225 0.7490972 5.9192867 2 GATAA 43770 0.7489616 11.236013 5 GTGAC 23885 0.7462203 5.196342 6 AGTGG 23585 0.7448064 9.587214 5 GTGAT 27940 0.7265481 6.582187 6 TGTGT 24950 0.7257736 11.991131 5 TTAAA 51335 0.72331417 5.9032197 6 ATCTA 36785 0.69659555 5.2433376 6 AGTCG 22225 0.69435817 12.105957 5 CATAT 36280 0.6870325 6.612308 5 AGTGC 21910 0.6845169 10.39385 5 TCGCA 21905 0.6770478 6.564492 7 GATAC 29420 0.6765848 6.4352574 5 GTAAA 39390 0.6740141 10.288841 6 ATAAA 53040 0.66807353 6.6574674 6 TAGAG 28525 0.6630876 5.3090534 7 TCGAC 21440 0.6626753 5.35051 7 TAGCC 21175 0.6544846 5.8001328 7 GTTAG 25130 0.6534772 8.373685 5 CATAC 28610 0.6509262 6.0244455 5 AGTGA 27890 0.6483265 9.683871 5 TAGCA 27705 0.63714415 6.2894053 7 TTAGC 24680 0.63491756 6.0253334 6 TGTGA 24260 0.63085383 15.536716 5 GTGCA 20105 0.6281247 7.6808906 6 TCACG 19295 0.5963769 7.973309 7 TGTAC 22385 0.5758765 7.9473486 5 GATAG 24035 0.5587138 12.0512905 5 GTAGG 17690 0.5586443 5.1912146 6 AGTAA 32180 0.55064166 9.1199255 5 ATAGC 23795 0.54722416 6.133438 6 GTGAG 17005 0.5370122 6.278461 6 CATAA 31565 0.5343467 9.6710415 5 ATAGA 30650 0.5244613 8.040232 6 TGTAA 27115 0.51902145 14.277186 5 TGTAT 23685 0.5071562 8.473622 5 AGTAG 21565 0.5012966 9.402036 5 GTAGC 16015 0.50034404 9.695797 6 CATAG 18970 0.43626153 10.439171 5 >>END_MODULE