##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL7_ATCACG_L008_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11713549 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.216674041317454 34.0 33.0 34.0 31.0 34.0 2 33.352269581149145 34.0 34.0 34.0 31.0 34.0 3 33.3732271064901 34.0 34.0 34.0 31.0 34.0 4 36.62070965853304 37.0 37.0 37.0 35.0 37.0 5 36.56020348743152 37.0 37.0 37.0 35.0 37.0 6 36.54462178798245 37.0 37.0 37.0 35.0 37.0 7 36.54783285578094 37.0 37.0 37.0 35.0 37.0 8 36.55278404521123 37.0 37.0 37.0 35.0 37.0 9 38.39924151083502 39.0 39.0 39.0 37.0 39.0 10-14 38.701776925165895 39.4 39.2 39.4 37.2 39.4 15-19 39.965406863453595 41.0 40.0 41.0 38.0 41.0 20-24 39.899369781097086 41.0 40.0 41.0 38.0 41.0 25-29 39.72963744805268 41.0 40.0 41.0 38.0 41.0 30-34 39.55786079863584 41.0 40.0 41.0 37.0 41.0 35-39 39.34847711824999 41.0 39.4 41.0 36.8 41.0 40-44 39.14436278876709 40.4 39.0 41.0 36.0 41.0 45-49 38.999937508265 40.0 39.0 41.0 35.4 41.0 50-54 38.97109468701587 40.0 39.0 41.0 35.0 41.0 55-59 38.65830748648424 40.0 38.2 41.0 35.0 41.0 60-64 38.189888683609034 40.0 37.4 41.0 34.0 41.0 65-69 37.53123146537399 39.0 36.0 41.0 33.6 41.0 70-74 37.05777758730509 38.2 35.2 40.4 33.4 41.0 75-79 35.92072040676997 36.2 34.8 39.2 32.4 40.2 80-84 35.54057713849151 35.8 35.0 37.8 33.0 39.4 85-89 34.76404124830143 35.0 35.0 36.6 32.4 38.0 90-94 34.21547379022361 35.0 34.8 35.8 32.0 36.8 95-99 33.880614184479874 35.0 34.0 35.0 31.8 36.0 100-101 33.52432132225681 35.0 34.0 35.0 30.5 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 0.0 9 0.0 10 0.0 11 5.0 12 26.0 13 72.0 14 286.0 15 1012.0 16 2523.0 17 4901.0 18 7400.0 19 9603.0 20 11401.0 21 13402.0 22 16021.0 23 18894.0 24 23182.0 25 28050.0 26 34585.0 27 42475.0 28 52167.0 29 65221.0 30 81645.0 31 100798.0 32 130712.0 33 179406.0 34 271801.0 35 461770.0 36 938763.0 37 2301932.0 38 4585176.0 39 2300712.0 40 29607.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.054115937990467 30.862150158247516 30.262908066183936 19.82082583757808 2 20.028385552088658 30.29863140966179 30.474692181790132 19.198290856459415 3 20.288522291578754 29.480715024968095 30.320912987174083 19.909849696279068 4 20.290605349412036 29.222501224863617 30.40657447200673 20.08031895371761 5 20.537456239778397 29.605109433528643 30.26051284713113 19.59692147956183 6 20.547598341032252 29.761552199081592 29.571268280860053 20.1195811790261 7 20.50253087258183 29.995588868924354 29.901168296645192 19.600711961848624 8 20.078816420198525 30.0104434616699 29.90387456440401 20.006865553727568 9 20.07327582784688 29.76092898915606 30.15807591704273 20.007719265954325 10-14 20.032309074356615 29.858434840091284 30.077633399318227 20.031622686233874 15-19 20.027005299091176 29.68559577143616 30.14780979822366 20.13958913124901 20-24 20.155131278771538 29.588683662188476 29.996533226625555 20.259651832414427 25-29 20.324543916055422 29.5480076862995 29.7714699367291 20.35597846091598 30-34 20.437015980010745 29.541244913312003 29.688890177537004 20.332848929140248 35-39 20.528527663786907 29.453021442694887 29.594712281005584 20.423738612512622 40-44 20.5433810142732 29.44843735244328 29.56943365030118 20.43874798298234 45-49 20.59424003836286 29.362034775219342 29.54170696952557 20.502018216892225 50-54 20.529396397773166 29.395132231511667 29.54271044249826 20.532760928216906 55-59 20.597901636925396 29.356000704964742 29.514240356089168 20.531857302020697 60-64 20.56208401356648 29.38507959654472 29.48477576467065 20.568060625218145 65-69 20.58535740964484 29.40979897322836 29.412791096561936 20.592052520564867 70-74 20.621703402112505 29.41849731882754 29.407493038635646 20.552306240424308 75-79 20.610182435509223 29.371709692395008 29.439333932232824 20.578773939862945 80-84 20.614537294566475 29.404259132377558 29.425263388176848 20.555940184879116 85-89 20.592359899110548 29.396293845872567 29.386395758263017 20.62495049675387 90-94 20.59478785641887 29.36045437702707 29.37545020577847 20.66930756077559 95-99 20.6138406080154 29.417537837623964 29.30570932654154 20.662912227819096 100-101 20.722036473113185 29.38885521851315 29.19102338201987 20.698084926353797 >>END_MODULE >>Per base GC content pass #Base %GC 1 38.87494177556855 2 39.22667640854807 3 40.198371987857826 4 40.370924303129655 5 40.13437771934022 6 40.667179520058355 7 40.10324283443045 8 40.08568197392609 9 40.0809950938012 10-14 40.063931760590485 15-19 40.16659443034018 20-24 40.41478311118596 25-29 40.6805223769714 30-34 40.769864909150996 35-39 40.952266276299525 40-44 40.98212899725554 45-49 41.09625825525508 50-54 41.06215732599007 55-59 41.12975893894609 60-64 41.13014463878463 65-69 41.177409930209706 70-74 41.17400964253682 75-79 41.188956375372165 80-84 41.170477479445594 85-89 41.217310395864416 90-94 41.264095417194454 95-99 41.27675283583449 100-101 41.42012139946698 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 160.0 1 154.5 2 187.0 3 261.0 4 334.0 5 408.0 6 531.5 7 725.0 8 989.5 9 1305.0 10 1609.0 11 2158.0 12 3045.5 13 3994.5 14 5079.0 15 6678.5 16 8992.0 17 12527.5 18 18173.0 19 26276.0 20 37059.0 21 50901.0 22 67320.0 23 87142.0 24 110421.0 25 136222.5 26 164318.0 27 194674.0 28 227199.5 29 259806.0 30 290847.5 31 320549.5 32 349708.0 33 376955.0 34 401807.5 35 425510.0 36 447791.5 37 463995.0 38 471549.0 39 471146.5 40 463094.0 41 447516.5 42 424466.5 43 397128.5 44 370785.5 45 347913.0 46 328422.0 47 314041.0 48 301959.0 49 289109.0 50 273722.5 51 255298.5 52 235710.0 53 216857.5 54 200699.5 55 185917.5 56 171850.5 57 158445.5 58 143149.0 59 126009.5 60 108359.5 61 91147.5 62 75560.0 63 62397.5 64 51523.0 65 42497.5 66 34956.0 67 28403.0 68 23260.0 69 18929.0 70 15100.0 71 11947.0 72 9520.5 73 7719.0 74 6313.0 75 5120.5 76 4196.5 77 3566.0 78 3013.5 79 2458.0 80 1961.5 81 1507.5 82 1117.0 83 813.5 84 557.0 85 345.0 86 231.0 87 142.5 88 89.5 89 68.5 90 54.0 91 36.0 92 25.0 93 25.5 94 23.0 95 17.5 96 11.0 97 5.5 98 2.5 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0021598919336914884 2 0.004678343002620299 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 5.088124871462953E-4 15-19 0.0012310530309814728 20-24 5.412535517630054E-4 25-29 0.013601343196669089 30-34 0.008675423648289686 35-39 0.030281172683018616 40-44 0.01665592554400037 45-49 0.0189609485562403 50-54 0.026876568322717564 55-59 0.01984880927206605 60-64 0.03904367497843736 65-69 0.08098314183002948 70-74 0.03039215527249683 75-79 0.01765476884930434 80-84 0.005844513904368352 85-89 0.018745813075097904 90-94 0.03095560534215548 95-99 0.014408954963179819 100-101 0.0027148048810825822 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.1713549E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.2914600935688965 #Duplication Level Relative count 1 100.0 2 3.4580583351075154 3 0.7313178624654034 4 0.5162869916968278 5 0.37257824143070045 6 0.2906110283159464 7 0.19001490312965721 8 0.16978922716627634 9 0.13306365765382158 10++ 0.589205876091122 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2096920 3.5971854 3.9027205 25-29 CTGGG 2046250 3.4815001 3.6577444 85-89 CCAGG 1871305 3.204371 3.4748333 25-29 GGAGG 1840955 3.1410575 3.4152613 70-74 CCTCC 1815100 3.1049638 3.453644 70-74 CCTGG 1806360 3.0788944 3.2319305 85-89 >>END_MODULE