##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL7_ATCACG_L007_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11651783 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.804040205692125 34.0 31.0 34.0 31.0 34.0 2 32.93488902084771 34.0 33.0 34.0 31.0 34.0 3 32.94210783019217 34.0 33.0 34.0 31.0 34.0 4 36.24037119469183 37.0 37.0 37.0 35.0 37.0 5 36.23422518253215 37.0 37.0 37.0 35.0 37.0 6 36.26418857955044 37.0 37.0 37.0 35.0 37.0 7 36.25561710169165 37.0 37.0 37.0 35.0 37.0 8 36.25235845878695 37.0 37.0 37.0 35.0 37.0 9 38.040614985706476 39.0 39.0 39.0 37.0 39.0 10-14 38.32378273780073 39.4 39.2 39.4 37.2 39.4 15-19 39.53966224740025 41.0 40.0 41.0 37.2 41.0 20-24 39.44843039043896 41.0 40.0 41.0 37.0 41.0 25-29 39.29031997935423 41.0 40.0 41.0 36.8 41.0 30-34 39.08078832226793 41.0 39.2 41.0 36.0 41.0 35-39 38.845791343693925 40.2 39.0 41.0 35.4 41.0 40-44 38.79473122697187 40.0 39.0 41.0 35.0 41.0 45-49 38.64865298298123 40.0 38.8 41.0 35.0 41.0 50-54 37.98399197788012 39.6 38.0 40.4 34.4 40.8 55-59 38.567140737173006 40.0 38.6 41.0 35.0 41.0 60-64 38.224186633067234 40.0 37.6 41.0 34.0 41.0 65-69 37.661262503773024 39.6 36.4 41.0 33.8 41.0 70-74 36.918808872427505 38.4 35.2 40.6 33.0 41.0 75-79 36.0306292350278 36.8 35.0 39.2 32.4 41.0 80-84 35.12414256255888 35.8 35.0 37.6 31.8 39.4 85-89 34.346888883872964 35.0 34.6 36.4 31.0 38.0 90-94 33.80082050961643 35.0 34.0 35.8 31.0 36.6 95-99 33.42091580318652 35.0 34.0 35.0 30.0 36.0 100-101 32.82195450258557 34.5 33.5 35.0 28.5 35.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 1.0 4 5.0 5 26.0 6 227.0 7 1650.0 8 4279.0 9 5231.0 10 6248.0 11 7665.0 12 9141.0 13 10934.0 14 12978.0 15 14354.0 16 15832.0 17 17888.0 18 19803.0 19 21207.0 20 22891.0 21 24237.0 22 26436.0 23 29191.0 24 32352.0 25 36354.0 26 41705.0 27 49430.0 28 59030.0 29 67026.0 30 80781.0 31 101445.0 32 132695.0 33 180899.0 34 272305.0 35 452069.0 36 903813.0 37 2216511.0 38 4488039.0 39 2261640.0 40 25465.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 17.77124907371494 32.82123840662136 30.421546017429446 18.98596650223425 2 21.01859987031876 32.841985320371855 27.873264542779136 18.266150266530257 3 20.697085937723468 31.023634735792072 28.86669419409725 19.412585132387214 4 20.52761404361227 29.740304831952024 29.365729382140728 20.366351742294974 5 20.341584464077823 30.014790154221043 30.034567036977272 19.609058344723863 6 20.543041914983537 30.126877203438507 28.991105395298028 20.33897548627993 7 20.576067823943198 30.096110871395908 29.72189192833653 19.605929376324365 8 19.918761782828923 30.329211939681528 29.913347389469298 19.83867888802025 9 19.974771308651448 29.95110063277747 30.227749242774436 19.846378815796644 10-14 19.998077146595424 30.12802598324336 30.00195375640572 19.871943113755492 15-19 20.061569854450447 29.864454330091412 30.049947131435488 20.024028684022653 20-24 20.247342002514962 29.695282808350353 29.874481558855393 20.182893630279295 25-29 20.425136747468372 29.70492139831389 29.621273110090424 20.24866874412732 30-34 20.562305210977662 29.615561513704225 29.552352549982082 20.269780725336034 35-39 20.58147644134686 29.54649957920401 29.486824586213846 20.385199393235286 40-44 20.640604752576568 29.525062881318025 29.455147154980367 20.379185211125044 45-49 20.666591801594763 29.44213051550405 29.39090385255992 20.500373830341267 50-54 20.631090701229077 29.47680795642485 29.4198064792898 20.472294863056273 55-59 20.698732981198432 29.46349498246737 29.371471716057247 20.466300320276954 60-64 20.62635255625761 29.493886970638467 29.34803996377268 20.53172050933124 65-69 20.658878658069593 29.482149930720148 29.306024723732165 20.552946687478094 70-74 20.67991630667697 29.50112717248269 29.299972138968496 20.518984381871842 75-79 20.677184594293173 29.490013656552723 29.31729701695546 20.51550473219864 80-84 20.672338045957247 29.527803891616834 29.298983421701646 20.50087464072427 85-89 20.64942664049889 29.483662439806462 29.29098200272352 20.57592891697113 90-94 20.655112456211842 29.459425149369146 29.2840716326344 20.601390761784614 95-99 20.742339835164948 29.502012873986505 29.192572820555302 20.563074470293248 100-101 20.842230128449533 29.47678388272036 29.104936408823512 20.576049580006593 >>END_MODULE >>Per base GC content pass #Base %GC 1 36.75721557594919 2 39.28475013684901 3 40.10967107011068 4 40.89396578590725 5 39.95064280880168 6 40.88201740126347 7 40.18199720026756 8 39.75744067084918 9 39.821150124448096 10-14 39.87002026035092 15-19 40.0855985384731 20-24 40.43023563279426 25-29 40.673805491595694 30-34 40.832085936313696 35-39 40.96667583458215 40-44 41.01978996370161 45-49 41.16696563193603 50-54 41.10338556428535 55-59 41.16503330147538 60-64 41.15807306558885 65-69 41.21182534554769 70-74 41.19890068854881 75-79 41.192689326491816 80-84 41.173212686681524 85-89 41.22535555747002 90-94 41.25650321799645 95-99 41.30541430545819 100-101 41.418279708456126 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 274.0 1 279.5 2 317.5 3 436.0 4 512.5 5 594.0 6 816.5 7 1056.5 8 1337.0 9 1647.5 10 2018.5 11 2633.0 12 3467.0 13 4446.5 14 5626.0 15 7256.0 16 9689.5 17 13263.5 18 18709.5 19 26602.0 20 37615.0 21 51687.0 22 68381.5 23 87669.5 24 109799.5 25 135684.5 26 164307.5 27 194123.5 28 225626.5 29 257784.5 30 288851.5 31 318770.5 32 347462.5 33 374831.0 34 399968.0 35 422917.0 36 444670.0 37 461003.5 38 468067.5 39 467267.5 40 459125.0 41 443893.5 42 420116.0 43 392618.0 44 367574.5 45 344809.5 46 325807.0 47 312137.5 48 300331.5 49 286889.0 50 271723.0 51 254482.5 52 235056.0 53 216472.0 54 200207.5 55 185418.0 56 171440.0 57 157361.0 58 142164.0 59 124719.5 60 106993.0 61 90001.0 62 74728.0 63 62019.5 64 51625.0 65 42721.5 66 35073.0 67 28881.5 68 23533.0 69 18812.5 70 15012.0 71 11994.5 72 9623.0 73 7775.0 74 6296.0 75 5185.5 76 4302.0 77 3658.5 78 3074.0 79 2515.0 80 2046.5 81 1627.5 82 1239.5 83 917.5 84 655.0 85 437.5 86 300.0 87 210.0 88 164.5 89 144.5 90 107.5 91 82.0 92 71.0 93 58.0 94 50.0 95 44.5 96 34.5 97 32.0 98 27.5 99 15.0 100 11.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0729416261871681 2 0.08058852452023867 3 0.08635588218558482 4 0.06350959333863324 5 0.05899526278510336 6 0.005793104797780735 7 0.011878010429820054 8 0.011629121482952438 9 0.02015142231879876 10-14 0.02084659489453245 15-19 0.023220480505000824 20-24 0.018436663298655665 25-29 0.0032527210642354053 30-34 0.005041288530690968 35-39 0.008639021169549758 40-44 0.02244806653196339 45-49 0.020432924300083515 50-54 0.022410304071059338 55-59 0.025659592184303467 60-64 0.021047422527522182 65-69 0.024008342757499003 70-74 0.027937355167016068 75-79 0.029655547138150447 80-84 0.02574713243458104 85-89 0.020963315228235885 90-94 0.0245267183571819 95-99 0.037396851623481144 100-101 0.033145141820784 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.1651783E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.328325174720593 #Duplication Level Relative count 1 100.0 2 3.502722033303 3 0.7242790469956522 4 0.5044941488257739 5 0.35708393867309524 6 0.26555124500428395 7 0.21286672946235186 8 0.1750828849827844 9 0.13942770779784047 10++ 0.5518569961311471 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2078660 3.5986574 3.9245648 25-29 CTGGG 2031760 3.4742355 3.6725712 85-89 GGGGG 1334520 3.2467117 4.2133203 95-97 CCAGG 1853500 3.1781878 3.422297 25-29 GGAGG 1882925 3.1672304 3.424953 2 AAAAA 8211110 3.1561718 4.2730627 1 CCTCC 1771385 3.1175272 3.4637275 3 CCTGG 1793725 3.0967977 3.3291495 3 TTTTT 7725265 3.072716 3.640249 10-14 >>END_MODULE