##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL7_ATCACG_L007_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 11651783 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.22014476239388 34.0 33.0 34.0 31.0 34.0 2 33.36626814969005 34.0 34.0 34.0 31.0 34.0 3 33.39459497314703 34.0 34.0 34.0 31.0 34.0 4 36.640269133058865 37.0 37.0 37.0 35.0 37.0 5 36.583116506718326 37.0 37.0 37.0 35.0 37.0 6 36.573851229464196 37.0 37.0 37.0 35.0 37.0 7 36.575851610006815 37.0 37.0 37.0 35.0 37.0 8 36.5731521948186 37.0 37.0 37.0 35.0 37.0 9 38.43535517268044 39.0 39.0 39.0 37.0 39.0 10-14 38.73777817523721 39.4 39.2 39.4 37.2 39.4 15-19 40.01715119479997 41.0 40.0 41.0 38.0 41.0 20-24 39.9604584980685 41.0 40.0 41.0 38.0 41.0 25-29 39.801534305951286 41.0 40.0 41.0 38.0 41.0 30-34 39.64484060508164 41.0 40.0 41.0 37.6 41.0 35-39 39.44836521586439 41.0 40.0 41.0 37.0 41.0 40-44 39.2596428889896 41.0 39.0 41.0 36.2 41.0 45-49 39.11792372034391 40.2 39.0 41.0 35.8 41.0 50-54 39.084326922325964 40.6 39.0 41.0 35.4 41.0 55-59 38.78718623578898 40.0 38.4 41.0 35.0 41.0 60-64 38.32052297918697 40.0 37.4 41.0 34.6 41.0 65-69 37.661917939941034 39.2 36.2 41.0 34.0 41.0 70-74 37.179663266986694 38.4 35.2 40.4 34.0 41.0 75-79 36.04127097114665 36.4 34.8 39.2 32.6 40.2 80-84 35.65084885291805 35.8 35.0 37.8 33.0 39.4 85-89 34.89233354242866 35.0 35.0 36.6 33.0 38.0 90-94 34.34235527729962 35.0 35.0 35.8 32.4 36.8 95-99 34.01528150670159 35.0 34.8 35.0 32.0 36.0 100-101 33.67885142557152 35.0 34.0 35.0 31.5 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 3.0 11 10.0 12 16.0 13 92.0 14 341.0 15 1086.0 16 2669.0 17 5062.0 18 7422.0 19 9273.0 20 10827.0 21 12669.0 22 14517.0 23 17464.0 24 21241.0 25 26088.0 26 31328.0 27 38156.0 28 47150.0 29 59376.0 30 73593.0 31 91122.0 32 118080.0 33 160750.0 34 244393.0 35 419188.0 36 868739.0 37 2230647.0 38 4659915.0 39 2447306.0 40 33255.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 19.09137488006124 30.925223442255174 30.192099404554497 19.791302273129084 2 20.029353155940637 30.29743867578281 30.46782568630319 19.205382481973363 3 20.335725302085827 29.45668751378579 30.29284666596289 19.914740518165488 4 20.291547021188062 29.231055503142713 30.388715628961005 20.088681846708223 5 20.576095521174743 29.563595545849076 30.2745768608976 19.58573207207858 6 20.560338276124778 29.725888303961717 29.565646734066362 20.14812668584714 7 20.539071144733814 29.97042598544789 29.873702591268646 19.616800278549643 8 20.11922123850058 29.965370965113237 29.90751715853273 20.00789063785345 9 20.070825211901045 29.71121243847401 30.17608549695785 20.041876852667098 10-14 20.04504892644692 29.852350405637733 30.06593157987246 20.03666908804289 15-19 20.03937605939022 29.678898019610788 30.142093676915483 20.139632244083508 20-24 20.157064710684146 29.568751527267388 30.007808074078657 20.266375687969806 25-29 20.329255705692827 29.556367443260314 29.77520048522826 20.339176365818602 30-34 20.43648405402334 29.53532943711782 29.696768439075083 20.331418069783755 35-39 20.553823875233853 29.43564582194396 29.59449835031551 20.416031952506668 40-44 20.556103188038293 29.42679138059322 29.56983969242295 20.447265738945536 45-49 20.60179038403856 29.360093689633686 29.532537351461635 20.505578574866117 50-54 20.527817079179002 29.400360438752156 29.53724749821459 20.534574983854256 55-59 20.619755070590244 29.339377005163282 29.50732806083 20.533539863416472 60-64 20.57171586805381 29.358723387264014 29.494731228916223 20.574829515765956 65-69 20.596579080162943 29.390943316597966 29.409541603009416 20.602936000229676 70-74 20.630542450370466 29.415643938623354 29.38417089350195 20.569642717504227 75-79 20.616292166775075 29.374529946623362 29.42545468479436 20.583723201807203 80-84 20.630067964600933 29.3877349731593 29.423450706271886 20.558746355967884 85-89 20.589247337523037 29.39778816631279 29.38450608119332 20.62845841497086 90-94 20.592210359383426 29.35090883283597 29.378174126928613 20.67870668085199 95-99 20.61494675341962 29.40830327429536 29.313895527380634 20.662854444904386 100-101 20.72597447800354 29.35874538814744 29.20821716401959 20.70706296982943 >>END_MODULE >>Per base GC content pass #Base %GC 1 38.88267715319033 2 39.234735637914 3 40.250465820251314 4 40.380228867896285 5 40.16182759325332 6 40.70846496197191 7 40.15587142328346 8 40.127111876354036 9 40.11270206456815 10-14 40.08171801448981 15-19 40.17900830347373 20-24 40.42344039865395 25-29 40.66843207151143 30-34 40.76790212380709 35-39 40.969855827740524 40-44 41.00336892698383 45-49 41.10736895890468 50-54 41.06239206303326 55-59 41.153294934006716 60-64 41.14654538381976 65-69 41.199515080392615 70-74 41.2001851678747 75-79 41.20001536858228 80-84 41.18881432056881 85-89 41.2177057524939 90-94 41.27091704023542 95-99 41.277801198324006 100-101 41.433037447832966 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 179.0 1 165.0 2 182.0 3 253.0 4 341.0 5 405.5 6 535.5 7 774.0 8 1037.5 9 1316.5 10 1623.0 11 2159.5 12 3007.0 13 3950.0 14 5053.5 15 6690.5 16 8945.5 17 12566.5 18 18160.0 19 25855.5 20 36837.0 21 50577.0 22 67247.5 23 86873.5 24 109257.5 25 135047.5 26 163544.0 27 193669.0 28 224830.0 29 256690.5 30 288659.0 31 318569.5 32 346626.0 33 373963.0 34 399921.5 35 424006.0 36 445706.0 37 461186.0 38 468310.0 39 468356.0 40 460451.5 41 444693.5 42 421433.0 43 394453.5 44 368291.0 45 345511.5 46 326888.0 47 312944.0 48 301281.0 49 288558.5 50 273191.5 51 254995.0 52 235328.5 53 216467.5 54 200414.0 55 185811.5 56 171962.5 57 158240.5 58 142675.0 59 125508.5 60 107786.5 61 90523.0 62 74995.5 63 62126.5 64 51738.0 65 42978.0 66 35381.5 67 28608.0 68 22936.5 69 18467.5 70 14890.5 71 11785.0 72 9440.5 73 7603.5 74 6088.5 75 4989.5 76 4183.5 77 3511.5 78 2871.5 79 2317.0 80 1811.0 81 1369.0 82 1018.5 83 766.0 84 513.0 85 299.0 86 199.0 87 137.5 88 95.5 89 66.5 90 51.0 91 37.5 92 25.0 93 22.0 94 19.0 95 15.0 96 10.5 97 6.0 98 5.0 99 5.0 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 2.5747132434581045E-5 2 0.01070222471530752 3 0.0025146366011107486 4 0.005964752347344608 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 6.007664234735577E-5 15-19 2.8321845678039146E-4 20-24 0.0021816403549568338 25-29 0.011574194267091997 30-34 0.007028967154640625 35-39 0.029995409286286915 40-44 0.02447179114132146 45-49 0.02668261157970415 50-54 0.027480772685176166 55-59 0.023979162674073143 60-64 0.05388016580809993 65-69 0.09376762337575288 70-74 0.015568432745443337 75-79 0.017526931285967134 80-84 0.0028768129306905215 85-89 0.012906179251707657 90-94 0.015515222005078535 95-99 0.00896171856272984 100-101 0.0012659006780335678 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.1651783E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.3146714007170965 #Duplication Level Relative count 1 100.0 2 3.4497258742747645 3 0.70793633895779 4 0.5248310001596849 5 0.39069569383084046 6 0.29754617554692075 7 0.22142971203491776 8 0.1676691329110555 9 0.12721562782775322 10++ 0.5695427689359663 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2086885 3.5965111 3.9333258 25-29 CTGGG 2038985 3.4836276 3.681101 65-69 CCAGG 1867330 3.2113886 3.4641814 25-29 GGAGG 1834085 3.1410067 3.4236515 70-74 CCTCC 1810145 3.1121788 3.4183154 65-69 CCTGG 1792805 3.0694597 3.2989151 3 >>END_MODULE