FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | ZL6_CTTGTA_L008_R2_001.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 15696073 |
| Filtered Sequences | 0 |
| Sequence length | 101 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCCAG | 2810570 | 3.5852215 | 3.863229 | 25-29 |
| CTGGG | 2752970 | 3.489988 | 3.652114 | 85-89 |
| GGAGG | 2545575 | 3.1809113 | 3.4430685 | 70-74 |
| CCAGG | 2509890 | 3.1797352 | 3.4027452 | 25-29 |
| AAAAA | 10994820 | 3.1470718 | 4.253892 | 1 |
| GGGGG | 1732940 | 3.1301198 | 4.172589 | 95-97 |
| CCTCC | 2414420 | 3.1245768 | 3.4906585 | 3 |
| CCTGG | 2429340 | 3.1009595 | 3.440521 | 3 |
| TTTTT | 10383640 | 3.086211 | 3.6263144 | 10-14 |