FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | ZL6_CTTGTA_L007_R2_001.fastq.gz |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 15628660 |
| Filtered Sequences | 0 |
| Sequence length | 101 |
| %GC | 40 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| CCCAG | 2799930 | 3.5830476 | 3.9058285 | 25-29 |
| CTGGG | 2746150 | 3.4906414 | 3.666221 | 85-89 |
| CCAGG | 2498515 | 3.1747437 | 3.4193654 | 25-29 |
| GGAGG | 2530570 | 3.170207 | 3.4490097 | 70-74 |
| AAAAA | 10973615 | 3.1589468 | 4.227095 | 1 |
| GGGGG | 1739460 | 3.147407 | 4.061918 | 95-97 |
| CCTCC | 2407805 | 3.1263556 | 3.561009 | 3 |
| CCTGG | 2416155 | 3.0930324 | 3.3282518 | 3 |
| TTTTT | 10330145 | 3.086482 | 3.6197288 | 10-14 |