Basic Statistics
Measure | Value |
---|---|
Filename | ZL6_CTTGTA_L007_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 15628660 |
Filtered Sequences | 0 |
Sequence length | 101 |
%GC | 40 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CCCAG | 2821550 | 3.6084883 | 3.9488034 | 25-29 |
CTGGG | 2759935 | 3.4945424 | 3.7550786 | 1 |
CCAGG | 2514330 | 3.208032 | 3.432748 | 25-29 |
GGAGG | 2482835 | 3.1529858 | 3.4145877 | 70-74 |
CCTCC | 2449225 | 3.1230829 | 3.4134126 | 95-97 |
CCTGG | 2435075 | 3.0904727 | 3.2656522 | 3 |