##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL4_GCCAAT_L008_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15333671 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.75366414213531 34.0 31.0 34.0 31.0 34.0 2 32.889665560191034 34.0 33.0 34.0 31.0 34.0 3 32.89741888944924 34.0 33.0 34.0 31.0 34.0 4 36.20740251959234 37.0 37.0 37.0 35.0 37.0 5 36.19326493962209 37.0 37.0 37.0 35.0 37.0 6 36.21811613148606 37.0 37.0 37.0 35.0 37.0 7 36.220704944041124 37.0 37.0 37.0 35.0 37.0 8 36.20815217699663 37.0 37.0 37.0 35.0 37.0 9 38.00068965872556 39.0 39.0 39.0 37.0 39.0 10-14 38.27398002735287 39.4 39.2 39.4 37.0 39.4 15-19 39.47272506368501 41.0 40.0 41.0 37.0 41.0 20-24 39.382368318715066 41.0 40.0 41.0 37.0 41.0 25-29 39.206809171789324 41.0 39.6 41.0 36.2 41.0 30-34 38.996109359591706 40.8 39.0 41.0 36.0 41.0 35-39 38.74458508989791 40.0 39.0 41.0 35.0 41.0 40-44 38.654791458614184 40.0 38.8 41.0 35.0 41.0 45-49 38.511482266705734 40.0 38.0 41.0 34.8 41.0 50-54 37.86471123581561 39.6 37.8 40.4 33.8 40.8 55-59 38.4467338577957 40.0 38.2 41.0 34.6 41.0 60-64 38.08077401686785 40.0 37.4 41.0 34.0 41.0 65-69 37.512906426647604 39.4 36.2 41.0 33.4 41.0 70-74 36.76027325746065 38.2 35.0 40.4 32.6 41.0 75-79 35.88911470710438 36.6 35.0 39.2 32.0 40.8 80-84 34.98067265170878 35.6 35.0 37.6 31.0 39.2 85-89 34.214960827058306 35.0 34.2 36.4 31.0 38.0 90-94 33.68121555497049 35.0 34.0 35.6 30.0 36.6 95-99 33.29373002720614 35.0 34.0 35.0 29.6 36.0 100-101 32.65908861615721 34.5 33.0 35.0 27.5 35.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 28.0 4 66.0 5 148.0 6 614.0 7 3659.0 8 7841.0 9 7141.0 10 7108.0 11 8480.0 12 10591.0 13 13491.0 14 16481.0 15 18880.0 16 21395.0 17 24391.0 18 27295.0 19 30165.0 20 31958.0 21 34677.0 22 38171.0 23 41340.0 24 46572.0 25 52221.0 26 59582.0 27 70150.0 28 81809.0 29 95520.0 30 116078.0 31 145662.0 32 189973.0 33 260782.0 34 390891.0 35 647618.0 36 1276402.0 37 2989730.0 38 5747299.0 39 2788766.0 40 30696.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.002462734703496 32.36154559156714 30.080921130408676 19.55507054332069 2 20.457376248070208 32.316090258876194 28.772550898106665 18.453982594946932 3 20.39789180297114 30.723203281372996 29.301872046114475 19.577032869541387 4 20.309598941936198 29.75865155222793 29.72738381113031 20.20436569470556 5 20.29175830942773 30.03837101088435 30.147679866030735 19.522190813657183 6 20.421373402373792 30.15907271625323 29.211858397033964 20.207695484339006 7 20.4645286807805 30.195851372841993 29.811508577107215 19.52811136927029 8 19.852830691681525 30.322035785987676 29.990623636174902 19.8345098861559 9 19.819891947957853 30.020375087973843 30.319900495759445 19.839832468308863 10-14 19.90972802788164 30.161886028026963 30.084245628042666 19.84414031604873 15-19 19.968974478372196 29.935753703050654 30.12201955042556 19.97325226815159 20-24 20.144105235754513 29.762023349950095 29.940817098493262 20.15305431580213 25-29 20.317552903188936 29.75584034595223 29.72001801734512 20.206588733513716 30-34 20.457325923160198 29.664046140442206 29.62816067198677 20.250467264410823 35-39 20.5026536849616 29.596279171795764 29.567495881961094 20.333571261281545 40-44 20.557354358749656 29.587050234783774 29.505067862989844 20.350527543476733 45-49 20.569090515872578 29.51375343741512 29.47559403789683 20.441562008815474 50-54 20.55011938124024 29.542281381640002 29.473049147931395 20.434550089188367 55-59 20.604566133757032 29.523435704923372 29.435134367711107 20.436863793608488 60-64 20.56397104897698 29.51872960892823 29.42260124907375 20.494698093021043 65-69 20.575000260938545 29.51858534777889 29.398740188710754 20.50767420257181 70-74 20.61115944774929 29.53280887261839 29.364764722664006 20.491266956968314 75-79 20.596674358650574 29.509768050532603 29.39400008030435 20.499557510512478 80-84 20.613458107611628 29.549721299068167 29.37712019241773 20.45970040090247 85-89 20.577498007483655 29.525425239227545 29.362450221341053 20.53462653194775 90-94 20.57246004440337 29.512595091827603 29.35146257879354 20.563482284975485 95-99 20.61177361274614 29.540526405228455 29.303055807058442 20.544644174966958 100-101 20.702580177340803 29.524781790553188 29.226586275215112 20.546051756890897 >>END_MODULE >>Per base GC content pass #Base %GC 1 37.55753327802418 2 38.91135884301714 3 39.97492467251253 4 40.51396463664176 5 39.81394912308492 6 40.6290688867128 7 39.992640050050795 8 39.68734057783742 9 39.65972441626671 10-14 39.75386834393037 15-19 39.94222674652379 20-24 40.297159551556646 25-29 40.52414163670265 30-34 40.70779318757102 35-39 40.83622494624314 40-44 40.907881902226386 45-49 41.010652524688055 50-54 40.9846694704286 55-59 41.04142992736552 60-64 41.058669141998024 65-69 41.08267446351036 70-74 41.102426404717605 75-79 41.096231869163056 80-84 41.0731585085141 85-89 41.112124539431406 90-94 41.13594232937886 95-99 41.1564177877131 100-101 41.2486319342317 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 285.0 1 336.0 2 437.0 3 589.0 4 741.0 5 856.5 6 1116.0 7 1492.0 8 2035.0 9 2716.5 10 3618.5 11 5042.5 12 7035.5 13 9326.0 14 11840.5 15 15134.0 16 19170.5 17 24322.0 18 31789.5 19 41902.0 20 55149.5 21 72348.5 22 93715.5 23 118803.5 24 148023.5 25 181533.5 26 219117.5 27 258364.5 28 298662.5 29 340043.0 30 379616.0 31 417568.5 32 454706.5 33 490627.0 34 523842.0 35 554288.5 36 582587.5 37 603798.5 38 612986.5 39 611052.5 40 598917.5 41 575787.5 42 544927.5 43 510776.5 44 477430.5 45 450273.0 46 428753.5 47 410560.0 48 394320.5 49 376855.5 50 356518.0 51 332834.0 52 307697.5 53 283965.5 54 262217.5 55 242681.0 56 224232.5 57 205912.0 58 186130.0 59 163843.0 60 140665.0 61 118304.5 62 98522.0 63 81782.5 64 68069.5 65 56311.5 66 46201.0 67 37775.5 68 30407.5 69 24548.0 70 19523.0 71 15291.5 72 12343.0 73 10079.0 74 8094.5 75 6534.0 76 5395.0 77 4569.5 78 3903.0 79 3272.0 80 2676.5 81 2113.0 82 1657.5 83 1230.0 84 873.5 85 624.5 86 429.5 87 309.0 88 237.0 89 168.0 90 137.5 91 115.5 92 85.5 93 67.0 94 62.5 95 59.5 96 40.5 97 32.0 98 27.0 99 12.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.09735437782641873 2 0.08294165174145188 3 0.09280230415795408 4 0.09370228433882533 5 0.07792002319601092 6 0.03561443309954935 7 0.013336662825229523 8 0.044568583739666774 9 0.052779272491238406 10-14 0.04975586081115214 15-19 0.021680392125277764 20-24 0.01621399076581205 25-29 0.008702417053294022 30-34 0.010171080362947659 35-39 0.012121037421502 40-44 0.026308116301699706 45-49 0.024555111427654867 50-54 0.03620007237666701 55-59 0.04015215925788417 60-64 0.027180705781413985 65-69 0.028636325900040505 70-74 0.030026730063531428 75-79 0.045515519408235644 80-84 0.047932422705560855 85-89 0.03302535968066616 90-94 0.04504466021215663 95-99 0.03504314133256152 100-101 0.05646723475415639 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.5333671E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.722890005828219 #Duplication Level Relative count 1 100.0 2 3.5246807760706216 3 0.6558042413658672 4 0.5110787125302402 5 0.37917020469850626 6 0.289985100213083 7 0.22643403773544601 8 0.19545957030937083 9 0.1692914857597556 10++ 0.8566042370935268 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2648740 3.510265 3.816068 25-29 CTGGG 2593815 3.4136071 3.5656037 85-89 GGGGG 1760930 3.3340843 4.274913 95-97 AAAAA 11084280 3.2174935 4.2449 1 GGAGG 2444165 3.1803885 3.4553168 70-74 TTTTT 10492420 3.1265028 3.7072392 10-14 CCTCC 2332300 3.1261508 3.440971 70-74 CCAGG 2368030 3.1191587 3.3610063 25-29 CCTGG 2277930 3.0162356 3.2309523 3 >>END_MODULE