##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL4_GCCAAT_L008_R1_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15333671 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.21872055295826 34.0 33.0 34.0 31.0 34.0 2 33.35346173789694 34.0 34.0 34.0 31.0 34.0 3 33.37395852565247 34.0 34.0 34.0 31.0 34.0 4 36.62200662841925 37.0 37.0 37.0 35.0 37.0 5 36.56171891258134 37.0 37.0 37.0 35.0 37.0 6 36.54527607902896 37.0 37.0 37.0 35.0 37.0 7 36.54855526768508 37.0 37.0 37.0 35.0 37.0 8 36.55325838150564 37.0 37.0 37.0 35.0 37.0 9 38.398398335271445 39.0 39.0 39.0 37.0 39.0 10-14 38.7018368008548 39.4 39.2 39.4 37.2 39.4 15-19 39.964901099025795 41.0 40.0 41.0 38.0 41.0 20-24 39.895639811236336 41.0 40.0 41.0 38.0 41.0 25-29 39.722540949261266 41.0 40.0 41.0 38.0 41.0 30-34 39.5483623458466 41.0 40.0 41.0 37.0 41.0 35-39 39.33496363656165 41.0 39.4 41.0 36.6 41.0 40-44 39.127362208306145 40.4 39.0 41.0 35.8 41.0 45-49 38.973560917017195 40.0 39.0 41.0 35.0 41.0 50-54 38.9337009513247 40.0 39.0 41.0 35.0 41.0 55-59 38.6102431048638 40.0 38.0 41.0 35.0 41.0 60-64 38.13475669329283 40.0 37.2 41.0 34.0 41.0 65-69 37.47571224138043 39.0 35.8 41.0 33.4 41.0 70-74 37.012429482802915 38.2 35.0 40.2 33.0 41.0 75-79 35.888950845495515 36.2 34.8 39.2 32.4 40.2 80-84 35.521126271719275 35.8 35.0 37.8 33.0 39.4 85-89 34.753030021317144 35.0 35.0 36.6 32.4 38.0 90-94 34.2078876610826 35.0 34.8 35.8 32.0 36.8 95-99 33.874131954441964 35.0 34.0 35.0 31.8 36.0 100-101 33.51938909475754 35.0 34.0 35.0 30.5 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 0.0 9 0.0 10 3.0 11 10.0 12 17.0 13 102.0 14 381.0 15 1356.0 16 3418.0 17 6398.0 18 9805.0 19 12964.0 20 15409.0 21 18066.0 22 21514.0 23 25672.0 24 31002.0 25 37691.0 26 45848.0 27 55936.0 28 68754.0 29 85253.0 30 105424.0 31 132913.0 32 173775.0 33 237642.0 34 363779.0 35 619136.0 36 1259614.0 37 3044793.0 38 5927634.0 39 2988897.0 40 40462.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.979785373053673 31.203994338336628 30.01956590827169 19.796654380338012 2 20.020991439528434 30.424249997570584 30.616163904102528 18.93859465879845 3 20.147295451950157 29.540219038219877 30.421886578889033 19.890598930940932 4 20.17870345594346 29.380348645800474 30.488713368116482 19.952234530139588 5 20.45415608564968 29.718571632324704 30.318949715303006 19.508322566722608 6 20.42244808826275 29.86241194297178 29.68118332524547 20.03395664352 7 20.44664320761806 30.123354022660326 29.906974005115934 19.523028764605684 8 19.94788462593204 30.03880805842254 30.052555581765123 19.960751733880294 9 19.940652176507502 29.81864551548028 30.315499791276334 19.925202516735883 10-14 19.95762298846443 29.961247317540625 30.13789211071328 19.943237583281668 15-19 19.9763526575817 29.783843297441624 30.180901295595184 20.058902749381488 20-24 20.108543641513684 29.648570033762734 30.032195716062056 20.210690608661526 25-29 20.282302241843997 29.623874173732688 29.825364701141954 20.26845888328136 30-34 20.41353709371773 29.585333263728568 29.733823864306814 20.26730577824689 35-39 20.4713345146148 29.529715129671906 29.658178804144764 20.34077155156853 40-44 20.514380946652146 29.508211777018 29.605586761740177 20.371820514589672 45-49 20.531898267238834 29.43890406398257 29.59039510064657 20.438802568132026 50-54 20.499475261077837 29.4761782619791 29.568644253104203 20.455702223838856 55-59 20.550691938823956 29.439571318764823 29.549291823052805 20.460444919358416 60-64 20.52985696575197 29.433848413658698 29.523547948011586 20.512746672577737 65-69 20.537483202222173 29.448313623527312 29.486383691432465 20.52781948281805 70-74 20.59075859049026 29.463665982395863 29.446816786470052 20.49875864064382 75-79 20.571883920875482 29.440591541743316 29.47551709703251 20.512007440348686 80-84 20.5754565319514 29.453024906120824 29.479418009759627 20.492100552168147 85-89 20.53921369616883 29.453966022370103 29.453468981965237 20.55335129949583 90-94 20.53525004605375 29.420632426423825 29.453648648759728 20.590468878762696 95-99 20.549751644024642 29.452738660030658 29.39836549956504 20.599144196379665 100-101 20.62293384491767 29.43643537751524 29.31093060542846 20.629700172138627 >>END_MODULE >>Per base GC content pass #Base %GC 1 38.776439753391685 2 38.95958609832689 3 40.03789438289109 4 40.13093798608304 5 39.96247865237228 6 40.456404731782754 7 39.96967197222374 8 39.90863635981234 9 39.865854693243385 10-14 39.900860571746094 15-19 40.03525540696319 20-24 40.319234250175214 25-29 40.55076112512536 30-34 40.680842871964614 35-39 40.81210606618333 40-44 40.886201461241825 45-49 40.97070083537086 50-54 40.955177484916696 55-59 41.011136858182375 60-64 41.04260363832971 65-69 41.06530268504022 70-74 41.08951723113408 75-79 41.08389136122417 80-84 41.06755708411954 85-89 41.09256499566466 90-94 41.12571892481645 95-99 41.1488958404043 100-101 41.252634017056295 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 163.0 1 192.0 2 252.5 3 367.5 4 526.0 5 632.5 6 844.0 7 1231.0 8 1743.0 9 2313.5 10 3058.5 11 4367.5 12 6296.0 13 8678.5 14 11200.5 15 14367.0 16 18332.0 17 23504.0 18 30865.0 19 40672.0 20 53980.0 21 71308.5 22 92374.0 23 117481.5 24 146933.5 25 180989.0 26 218105.5 27 257861.5 28 298829.5 29 339874.0 30 379803.0 31 417373.5 32 454981.0 33 490710.5 34 524138.0 35 555987.5 36 583791.5 37 605066.5 38 615229.0 39 613160.5 40 600554.0 41 576994.0 42 545559.5 43 511699.0 44 478653.0 45 450478.5 46 428376.0 47 411072.5 48 395360.0 49 378096.0 50 357718.0 51 334068.5 52 308085.0 53 283601.0 54 262824.5 55 242994.5 56 224609.0 57 206411.0 58 186259.0 59 164382.0 60 141427.0 61 118897.5 62 98859.0 63 82199.0 64 68067.0 65 55781.0 66 45734.0 67 37451.5 68 30229.0 69 24105.5 70 19106.0 71 15094.0 72 12068.5 73 9749.0 74 7875.5 75 6375.5 76 5253.0 77 4431.0 78 3726.5 79 3060.0 80 2439.0 81 1892.0 82 1438.5 83 1029.0 84 700.0 85 439.0 86 277.0 87 195.0 88 125.0 89 88.0 90 64.0 91 55.0 92 42.5 93 29.0 94 20.0 95 15.5 96 12.5 97 9.5 98 7.0 99 3.5 100 2.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.002399947148989958 2 0.00491728301722399 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-14 4.8520670620883936E-4 15-19 0.001259972253219728 20-24 5.099887691603661E-4 25-29 0.013900128677601077 30-34 0.009048061615512684 35-39 0.03044541649550196 40-44 0.017143970286045657 45-49 0.019532178563111208 50-54 0.02701897021267771 55-59 0.020096948734585476 60-64 0.0394895651537065 65-69 0.08118082095279075 70-74 0.030974970051203 75-79 0.018107862102949776 80-84 0.005724656541802677 85-89 0.019078275515367456 90-94 0.031582782753066765 95-99 0.014411421765864156 100-101 0.002540161452531491 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.5333671E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.523669819981637 #Duplication Level Relative count 1 100.0 2 3.392598839598824 3 0.6431846447005322 4 0.49800105685111745 5 0.3928497082984163 6 0.2999749131300407 7 0.23699085663654462 8 0.18521582714612836 9 0.16333153633059158 10++ 0.9404907418774586 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2656195 3.5212505 3.8688266 25-29 CTGGG 2597105 3.4105847 3.5719316 75-79 GGAGG 2390540 3.142634 3.4407058 70-74 CCAGG 2366205 3.1280687 3.397723 25-29 CCTCC 2351760 3.1143792 3.4346979 95-97 TTTTT 10451340 3.0460932 3.4899435 15-19 CCTGG 2290485 3.0163372 3.1594508 85-89 AAAAA 10108985 3.0035594 3.4580905 1 >>END_MODULE