##FastQC 0.10.1 >>Basic Statistics pass #Measure Value Filename ZL4_GCCAAT_L007_R2_001.fastq.gz File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 15282102 Filtered Sequences 0 Sequence length 101 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.79645830135148 34.0 31.0 34.0 31.0 34.0 2 32.92821870970368 34.0 33.0 34.0 31.0 34.0 3 32.93868696858586 34.0 33.0 34.0 31.0 34.0 4 36.240548976835775 37.0 37.0 37.0 35.0 37.0 5 36.235509748593486 37.0 37.0 37.0 35.0 37.0 6 36.26034258899725 37.0 37.0 37.0 35.0 37.0 7 36.25740267929111 37.0 37.0 37.0 35.0 37.0 8 36.24964399530902 37.0 37.0 37.0 35.0 37.0 9 38.03744648478331 39.0 39.0 39.0 37.0 39.0 10-14 38.318193910759135 39.4 39.2 39.4 37.2 39.4 15-19 39.53370706464333 41.0 40.0 41.0 37.0 41.0 20-24 39.43933889461018 41.0 40.0 41.0 37.0 41.0 25-29 39.28215844914528 41.0 40.0 41.0 36.6 41.0 30-34 39.07327070582306 41.0 39.0 41.0 36.0 41.0 35-39 38.83279030594089 40.2 39.0 41.0 35.2 41.0 40-44 38.77230661070055 40.0 39.0 41.0 35.0 41.0 45-49 38.619037276416556 40.0 38.4 41.0 35.0 41.0 50-54 37.946612030203696 39.6 38.0 40.4 34.2 40.8 55-59 38.519338321390606 40.0 38.4 41.0 35.0 41.0 60-64 38.165741270409 40.0 37.4 41.0 34.0 41.0 65-69 37.60168141790966 39.4 36.2 41.0 33.8 41.0 70-74 36.86545091768135 38.4 35.0 40.6 33.0 41.0 75-79 35.98748228483228 36.8 35.0 39.2 32.2 41.0 80-84 35.09271283492284 35.6 35.0 37.6 31.8 39.4 85-89 34.324476541250675 35.0 34.6 36.4 31.0 38.0 90-94 33.7839112446704 35.0 34.0 35.6 30.8 36.6 95-99 33.40431199844105 35.0 34.0 35.0 30.0 36.0 100-101 32.80494698962224 34.5 33.5 35.0 28.5 35.5 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 7.0 5 34.0 6 354.0 7 3020.0 8 7394.0 9 6595.0 10 6612.0 11 7745.0 12 9921.0 13 12925.0 14 16019.0 15 18427.0 16 20608.0 17 23418.0 18 26603.0 19 28804.0 20 30605.0 21 33378.0 22 36162.0 23 39096.0 24 43442.0 25 49104.0 26 56406.0 27 66651.0 28 79549.0 29 89882.0 30 108839.0 31 136597.0 32 176948.0 33 242215.0 34 366681.0 35 609265.0 36 1222525.0 37 2936980.0 38 5810196.0 39 2924857.0 40 34236.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 18.022470535678387 32.364318876457496 30.058656883490777 19.55455370437334 2 20.498545660179904 32.3221335687433 28.739974911287398 18.439345859789395 3 20.408483243953253 30.71254229846388 29.29725148072458 19.581722976858284 4 20.360511666097015 29.762572630735324 29.66816740721534 20.208748295952322 5 20.2893503491201 30.0209237004825 30.155087591519504 19.534638358877903 6 20.416622112969502 30.159772939089933 29.195822889663148 20.227782058277413 7 20.486388157660514 30.15970184730276 29.79591791324525 19.55799208179147 8 19.862946641321656 30.305708137378744 29.996676772472004 19.834668448827596 9 19.88209306891812 30.005955887165392 30.288867072452387 19.8230839714641 10-14 19.914292225602193 30.15596285961536 30.073918962982532 19.855825951799915 15-19 19.970250354970926 29.918899281984025 30.118782327592413 19.992068035452636 20-24 20.16199431670997 29.743267602484895 29.938609262880505 20.15612881792463 25-29 20.33233445764107 29.730852720921312 29.707064606639005 20.229748214798608 30-34 20.474319908761878 29.65433510638994 29.60818729676183 20.263157688086352 35-39 20.519481967702664 29.58360221254565 29.54943103710224 20.347484782649442 40-44 20.563636792760516 29.57323875741702 29.502226445679725 20.360898004142744 45-49 20.57862186777033 29.49728423747181 29.466624914905392 20.45746897985247 50-54 20.56302765278854 29.526741275964717 29.462974797023417 20.44725627422332 55-59 20.629980613119315 29.517678804299795 29.417268175041915 20.43507240753897 60-64 20.567892267053644 29.506986274983486 29.41478104579677 20.510340412166105 65-69 20.596307078053925 29.49766622225788 29.383048576724867 20.522978122963327 70-74 20.623427415623915 29.51955991122653 29.355890175637228 20.501122497512327 75-79 20.61251294094619 29.50147054391784 29.38274674736202 20.50326976777395 80-84 20.611607025508853 29.541232812112682 29.371414406601538 20.475745755776927 85-89 20.571800147835813 29.524048085896144 29.360125974993736 20.544025791274308 90-94 20.575634932994 29.49218424783282 29.35059233394014 20.581588485233045 95-99 20.62857678062571 29.529952952457865 29.294770228637717 20.546700038278708 100-101 20.716281994367215 29.503640312297204 29.222865033718037 20.557212659617544 >>END_MODULE >>Per base GC content pass #Base %GC 1 37.57702424005173 2 38.9378915199693 3 39.99020622081154 4 40.56925996204934 5 39.823988707998 6 40.64440417124692 7 40.04438023945199 8 39.69761509014925 9 39.705177040382225 10-14 39.77011817740211 15-19 39.96231839042356 20-24 40.3181231346346 25-29 40.56208267243968 30-34 40.73747759684823 35-39 40.8669667503521 40-44 40.92453479690326 45-49 41.0360908476228 50-54 41.01028392701186 55-59 41.06505302065829 60-64 41.07823267921975 65-69 41.119285201017256 70-74 41.124549913136235 75-79 41.11578270872014 80-84 41.08735278128578 85-89 41.115825939110124 90-94 41.15722341822705 95-99 41.17527681890442 100-101 41.27349465398476 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 353.0 1 350.5 2 428.0 3 587.5 4 728.0 5 854.0 6 1099.5 7 1490.5 8 2009.5 9 2666.5 10 3535.5 11 4861.5 12 6832.0 13 9184.0 14 11706.5 15 14916.0 16 18913.5 17 24119.5 18 31238.0 19 41093.5 20 54368.0 21 71412.0 22 92483.0 23 117633.5 24 146649.0 25 179994.0 26 217334.5 27 256789.0 28 297494.5 29 337175.0 30 376635.0 31 415955.0 32 452727.0 33 488353.0 34 522316.0 35 552538.0 36 579758.0 37 601175.5 38 611754.5 39 610514.0 40 596974.0 41 572927.0 42 543106.0 43 509318.0 44 475891.5 45 448502.5 46 427037.5 47 409785.0 48 393744.0 49 375493.5 50 355758.0 51 332729.0 52 307166.0 53 283496.0 54 262390.0 55 243119.5 56 224758.5 57 206004.0 58 185899.0 59 164428.5 60 141051.5 61 118782.5 62 99194.0 63 82041.5 64 68196.5 65 56487.0 66 46318.0 67 37902.5 68 30703.0 69 24555.5 70 19451.5 71 15447.5 72 12311.5 73 9761.0 74 7937.5 75 6596.5 76 5463.0 77 4570.0 78 3742.0 79 3103.0 80 2552.5 81 1967.5 82 1496.0 83 1122.0 84 836.0 85 585.5 86 374.5 87 258.0 88 191.0 89 142.0 90 117.5 91 105.5 92 82.0 93 65.5 94 57.5 95 48.5 96 34.0 97 24.5 98 17.0 99 15.0 100 13.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.07368096352190294 2 0.08040124323211559 3 0.08654568592723698 4 0.06309341476715703 5 0.05883352957597064 6 0.00599393983890436 7 0.012288885390242784 8 0.011621437940932471 9 0.020298254781966514 10-14 0.020991876641053696 15-19 0.02399931632441663 20-24 0.01913349354689558 25-29 0.0034079081529491163 30-34 0.005038573882048425 35-39 0.00907466786964254 40-44 0.023717941419315224 45-49 0.02110704404407195 50-54 0.023174822416445067 55-59 0.02642437539024409 60-64 0.021979960610130727 65-69 0.02503713167206972 70-74 0.02868977055643262 75-79 0.03026808746597818 80-84 0.026286959738915497 85-89 0.021333452688641914 90-94 0.025051527597447 95-99 0.03746081527266341 100-101 0.033477070104623044 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1.5282102E7 >>END_MODULE >>Sequence Duplication Levels pass #Total Duplicate Percentage 6.528675121639936 #Duplication Level Relative count 1 100.0 2 3.370205231044929 3 0.6746810598626104 4 0.47574348252762727 5 0.3994751888040278 6 0.2938729359559671 7 0.24800529077953662 8 0.18933737253061397 9 0.14240303793147588 10++ 0.8752186713316551 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Kmer Content warn #Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position CCCAG 2644020 3.5061433 3.801026 25-29 CTGGG 2587155 3.4092557 3.5908902 85-89 GGGGG 1762150 3.3364894 4.2716465 95-97 AAAAA 11047820 3.2209892 4.2617817 1 GGAGG 2440520 3.1785016 3.4445865 70-74 TTTTT 10461350 3.1386595 3.738675 10-14 CCTCC 2330475 3.1268454 3.4635942 3 CCAGG 2356120 3.1056612 3.3357341 25-29 CCTGG 2277615 3.019435 3.2472682 3 >>END_MODULE