FastQCFastQC Report
Thu 14 Mar 2024
AA02_undetermined_merged.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameAA02_undetermined_merged.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101679
Sequences flagged as poor quality0
Sequence length30-184183
%GC35

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTTGCTATAGATCCTCGTTCAGAAGCGTATTGCTAAGCCTATCTCCAGT4560.4484701855840439No Hit
ATTAAAGTTTTGTAAATTCGTTATTACGATTATTGAATTGGCTAGATAGA2020.19866442431573875No Hit
TGTAAAAGTTTCTTTCTTATGTTCATCGTATTCATAAAATGCTTCACGAA1970.19374698807029966No Hit
TGTAGAAGTTTCTTTCTTATGTTCATCGTATTCATAAAATGCTTCACGAA1430.14063867661955762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)