FastQCFastQC Report
Fri 15 Mar 2024
AA02_3264_a_merged.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameAA02_3264_a_merged.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences204173
Sequences flagged as poor quality0
Sequence length68-94894
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTCCTGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTTTC10510.5147595421529781No Hit
ATGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTTTCTGCCT9110.44619024062927026No Hit
ATGCCCTGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTTTC3700.1812188683126564No Hit
TTATGTCCTGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTT3320.16260720075622145No Hit
TGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTTTCTGCCTT3090.15134224407732658No Hit
TTATGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTTTCTGC2490.12195540056716607No Hit
TGTCCTGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACTTTCT2190.10726197881208582No Hit
GTTATGTCCTGTACTTCGTTCAGTTACGTATTGCTAAGGTTAAGACTACT2110.10334373301073109No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)