| Lane | Sample ID | Sample Ref | Index | Description | Control | Project | Yield (Mbases) | % PF | # Reads | % of raw clusters per lane | % Perfect Index Reads | % One Mismatch Reads (Index) | % of >= Q30 Bases (PF) | Mean Quality Score (PF) |
|---|
| 1 | MP2 | GCCAAT | N | A8P38 | 189 | 100.00 | 1,248,944 | 7.27 | 89.39 | 10.61 | 91.40 | 35.60 | ||
| 1 | MP3 | CAGATC | N | A8P38 | 125 | 100.00 | 827,417 | 4.82 | 88.36 | 11.64 | 92.26 | 35.81 | ||
| 1 | MP5 | CTTGTA | N | A8P38 | 103 | 100.00 | 681,450 | 3.97 | 91.76 | 8.24 | 93.39 | 36.07 | ||
| 1 | MP6 | AGTCAA | N | A8P38 | 140 | 100.00 | 924,487 | 5.38 | 91.81 | 8.19 | 93.14 | 36.02 | ||
| 1 | MP7 | AGTTCC | N | A8P38 | 172 | 100.00 | 1,136,516 | 6.61 | 90.82 | 9.18 | 91.36 | 35.60 | ||
| 1 | MP8 | ATGTCA | N | A8P38 | 163 | 100.00 | 1,076,693 | 6.27 | 91.91 | 8.09 | 93.40 | 36.08 | ||
| 1 | MPa | CGATGT | N | A8P38 | 185 | 100.00 | 1,223,263 | 7.12 | 90.97 | 9.03 | 92.84 | 35.94 | ||
| 1 | MPb | TGACCA | N | A8P38 | 118 | 100.00 | 781,898 | 4.55 | 82.96 | 17.04 | 88.25 | 34.86 | ||
| 1 | MPc | ACAGTG | N | A8P38 | 123 | 100.00 | 811,431 | 4.72 | 92.16 | 7.84 | 92.26 | 35.80 | ||
| 1 | MPuncut2 | CCGTCC | N | A8P38 | 207 | 100.00 | 1,374,113 | 8.00 | 69.56 | 30.44 | 79.86 | 32.89 | ||
| 1 | MPuncut3 | GTCCGC | N | A8P38 | 297 | 100.00 | 1,963,612 | 11.43 | 73.59 | 26.41 | 76.72 | 32.15 | ||
| 1 | MPuncut6 | GTGAAA | N | A8P38 | 118 | 100.00 | 780,044 | 4.54 | 86.93 | 13.07 | 90.31 | 35.35 | ||
| 1 | Undetermined | Undetermined | N | A8P38 | 657 | 100.00 | 4,353,173 | 25.33 | 0.00 | 0.00 | 75.95 | 31.99 |
| SampleID | Recipe | Operator | Directory |
|---|
| MP2 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MP2 | |
| MP3 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MP3 | |
| MP5 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MP5 | |
| MP6 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MP6 | |
| MP7 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MP7 | |
| MP8 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MP8 | |
| MPa | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MPa | |
| MPb | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MPb | |
| MPc | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MPc | |
| MPuncut2 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MPuncut2 | |
| MPuncut3 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MPuncut3 | |
| MPuncut6 | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_MPuncut6 | |
| Undetermined | Pui Ling | /scratch/gencore/manual/000000000-A8P38/Unaligned/Project_A8P38/Sample_Undetermined |
bcl2fastq-1.8.4