FastQCFastQC Report
Mon 14 Oct 2024
000000000-LRD8L_l01.1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LRD8L_l01.1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16695201
Sequences flagged as poor quality0
Sequence length301
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATT2619591.5690676620185646No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATT2449551.467218034691526No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTT1645300.9854927772358058No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTT1522410.9118847985118597No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATT1472300.8818701853305031No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATT1283830.7689814576056916No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATT1277620.7652618258384549No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATT1204450.7214348602331891No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATT1121320.6716421084118723No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATT1109890.6647958296518862No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATT1001500.5998729814633558No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATT970350.5812149251752046No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTT918960.5504336246086525No Hit
GAGTGTCAGCCGCCGCGGTAATACGGGGGGGGCAAGCGTTGTTCGGAATT890500.5333868097784508No Hit
GAGTGTCAGCAGCCGCGGTAATACGGGGGGGGCAAGCGTTGTTCGGAATT825830.4946511275904974No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTT802860.4808926828733598No Hit
GAGTGTCAGCCGCCGCGGTAAAACGTAGGAGGCGAGCGTTATCCGGATTT792300.4745675119454986No Hit
GAGTGTCAGCAGCCGCGGTAAAACGTAGGAGGCGAGCGTTATCCGGATTT759100.45468155789199544No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGATTT740200.443360939469971No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATT723760.4335137983663689No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGATTT701110.4199470254955301No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATT658160.3942210698751096No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT646460.3872130679948088No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATT637930.38210381534190574No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATT631270.37811464504081144No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT615920.3689203861636646No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATT613230.36730914470571513No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATT587430.3518556020978723No Hit
GAGTGTCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTGTTCGGAATT582010.34860916020118593No Hit
GAGTGTCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTGTTCGGAATT563180.33733046999553945No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATT558570.33456919745979696No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTGTCCGGAATT515180.3085796930507156No Hit
GAGTGCCAGCCGCCGCGGTAATACGGGGGGGGCAAGCGTTGTTCGGAATT511560.3064114052894601No Hit
GAGTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATT466760.2795773468076245No Hit
GAGTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATT462330.2769238896854252No Hit
GAGTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATC451280.27030522124291884No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATT447260.2678973436737898No Hit
GAGTGCCAGCCGCCGCGGTAAAACGTAGGAGGCGAGCGTTATCCGGATTT442580.2650941429216695No Hit
GAGTGCCAGCAGCCGCGGTAATACGGGGGGGGCAAGCGTTGTTCGGAATT437740.2621951062463998No Hit
GAGTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATC436510.2614583675871887No Hit
GAGTGTCAGCCGCCGCGGTAACACGTAGGATCCGAGCGTTATCCGAATTT429390.25719366900703977No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGCAGCGAGCGTTGTTCGGAGTT426390.25539674544798835No Hit
GAGTGTCAGCAGCCGCGGTAACACGTAGGATCCGAGCGTTATCCGAATTT423670.2537675347544483No Hit
GAGTGTCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATT420020.2515812777576023No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGATTT408290.24455530664171096No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGCAGCGAGCGTTGTTCGGAGTT401430.2404463414366799No Hit
GAGTGCCAGCAGCCGCGGTAAAACGTAGGAGGCGAGCGTTATCCGGATTT391940.23476207324488038No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATC369090.22107550547010485No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT365680.21903300235798298No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATT364750.218475956054677No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATT361740.2166730427504287No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGATTT360900.21616990415389428No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATT357910.2143789703400396No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATC352160.2109348668518576No Hit
GAGTGTCAGCCGCCGCGGTAATACCAGCACCCCGAGTGGTCGGGACGATT351110.2103059436061896No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATT344490.20634073228588262No Hit
GAGTGTCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATC342230.20498704987139715No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTGTCCGGAATT340560.2039867624235252No Hit
GAGTGTCAGCCGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGAATT337990.20244739790793773No Hit
GAGTGTCAGCAGCCGCGGTAATACCAGCACCCCGAGTGGTCGGGACGATT337670.2022557260616389No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTGTCCGGATTT335640.20103980778668074No Hit
GAGTGTCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATC333530.19977597155014784No Hit
GAGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATT332410.19910512008810194No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTGTCCGGAATC329630.19743997092338092No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATT325100.19472661634921318No Hit
GAGTGCCAGCCGCCGCGGTAATACAGAGGGTGCAAGCGTTGTTCGGAATT324290.19424144698826926No Hit
GAGTGTCAGCAGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGAATT323540.1937922160985064No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCGGAATT322660.1932651185211846No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTGTCCGGAATT314960.18865301471961912No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATT314650.18846733261851714No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTGTCCGGATTT310970.18626310638608065No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCGGAATT309650.18547246002009798No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTGTCCGGAATC305360.18290285933065437No Hit
GAGTGCCAGCAGCCGCGGTAATACAGAGGGTGCAAGCGTTGTTCGGAATT297500.17819491960593944No Hit
GAGTGTCAGCCGCCGCGGTAAAACGTAGGAGCCAAGCGTTATCCGAATTC295360.17691311413381605No Hit
GAGTGTCAGCAGCCGCGGTAAAACGTAGGAGCCAAGCGTTATCCGAATTC290450.17397214924216844No Hit
GAGTGTCAGCAGCCGCGGTAAAACGTAGGATCCGAGCGTTATCCGAATTT284160.17020459951335715No Hit
GAGTGTCAGCCGCCGCGGTAAAACGTAGGATCCGAGCGTTATCCGAATTT283180.16961760448406699No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATT264950.1586982989902308No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTGTCCGGATTT264690.15854256561511298No Hit
GAGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATT262910.15747639097007576No Hit
GAGTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATT261710.15675762154645517No Hit
GAGTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATC253520.1518520202302446No Hit
GAGTGCCAGCCGCCGCGGTAACACGTAGGATCCGAGCGTTATCCGAATTT250020.14975560941135121No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGCAGCAAGCGTTGTTCGGAGTT249100.14920455285324208No Hit
GAGTGCCAGCCGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATT248450.1488152194154476No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTGTCCGGATTT245490.14704225483718344No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGCAGCAAGCGTTGTTCGGAGTT243060.14558674675435174No Hit
GAGTGTCAGCCGCCGCGGTAATACAGAGGGGGCAAGCGTTATTCGGAATT241990.14494584401829003No Hit
GAGTGTCAGCCGCCGCGGTAAAACGTAGGAGGCAAGCGTTATCCGGATTC240900.14429296179183465No Hit
GAGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATT238670.1429572486129397No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGCAGCGAGCGTTGTTCGGAGTT238430.1428134947282156No Hit
GAGTGTCAGCCGCCGCGGTAAAACGTAGGATCCGAGCGTTATCCGAATTC234040.14018399658680358No Hit
GAGTGTCAGCAGCCGCGGTAAAACGTAGGATCCGAGCGTTATCCGAATTC233340.1397647144230249No Hit
GAGTGTCAGCAGCCGCGGTAAAACGTAGGAGGCAAGCGTTATCCGGATTC232970.1395430938507419No Hit
GAGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGCTCGGAATC228070.13660811870429113No Hit
GAGTGCCAGCAGCCGCGGTAACACGTAGGATCCGAGCGTTATCCGAATTT225340.1349729182655543No Hit
GAGTGTCAGCAGCCGCGGTAATACAGAGGGGGCAAGCGTTATTCGGAATT224980.1347572874384681No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCGAGCGTTGTCCGGATTT222940.1335353794183131No Hit
GAGTGTCAGCCGCCGCGGTAATACAGAGGGGGCAAGCGTTGTTCGGAATT221990.13296635362461345No Hit
GAGTGCCAGCAGCCGCGGTAATACGGAGGGGGCTAGCGTTGTTCGGAATT221230.13251113298965372No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGGGCGAGCGTTGTCCGGATTC219290.13134912242146712No Hit
GAGTGTCAGCAGCCGCGGTAATACAGAGGGGGCAAGCGTTGTTCGGAATT212090.12703650587974352No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGCAGCGAGCGTTGTTCGGAGTT211840.12688676224982257No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATC207370.12420934614683585No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTGTCCGGATTT205890.12332286385770379No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTC204520.12250226876573693No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATT204310.12237648411660333No Hit
GAGTGCCAGCCGCCGCGGTAATACCAGCACCCCGAGTGGTCGGGACGATT203290.12176553010652583No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGGGCGAGCGTTGTCCGGATTC203050.12162177622180172No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATC202730.12143010437550288No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTATCCGGAATT202690.12140614539471553No Hit
GAGTGTCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTATCCGGATTC199660.11959125260007351No Hit
GAGTGCCAGCCGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATC192760.11545832841425509No Hit
GAGTGCCAGCCGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATT192540.11532655401992466No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATC191330.1146017948511072No Hit
GAGTGCCAGCCGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGAATT190860.11432027682685582No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGATCCGAGCGTTATCCGAATTT189920.11375724077835302No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATT189100.11326608167221226No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGTGGCGAGCGTTGTCCGGAATT188540.11293065594118931No Hit
GAGTGTCAGCCGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATT187890.11254132250339483No Hit
GAGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCGGAATC187260.11216396855599402No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGTGGCGAGCGTTATCCGGAATT187030.11202620441646675No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGATCCGAGCGTTATCCGAATTT186880.11193635823851415No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGAATC185270.11097200926182321No Hit
GAGTGTCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCGGAATT184420.11046288092009195No Hit
GAGTGCCAGCAGCCGCGGTAATACCAGCACCCCGAGTGGTCGGGACGATT183440.10987588589080179No Hit
GAGTGTCAGCCGCCGCGGTAATACGTAGGGCGCAAGCGTTGTCCGGAATT181670.10881570099096141No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTGTCCGGATTT181440.10867793685143413No Hit
GAGTGTCAGCAGCCGCGGTAATACGGAGGGTGCGAGCGTTGTCCGGAATC179410.10746201857647596No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGGGCTAGCGTTGTCCGGAATC179140.10730029545616133No Hit
GAGTGCCAGCCGCCGCGGTAATACGTAGGGCGCAAGCGTTATCCGGAATT178330.10681512609521741No Hit
GAGTGCCAGCAGCCGCGGTAATACGAAGGGGGCTAGCGTTGTTCGGAATC174320.10441323827128526No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATG171570.10276605834215473No Hit
GAGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTTCGGAATT170990.10241865312073811No Hit
GAGTGTCAGCAGCCGCGGTAATACGTAGGGCGCAAGCGTTGTCCGGAATT170540.10214911458688038No Hit
GAGTGCCAGCAGCCGCGGTAATACAGAGGTGGCAAGCGTTGTTCGGAATT169520.10153816057680287No Hit
GAGTGTCAGCAGCCGCGGTAATACGGAGGATGCAAGCGTTATCCGGAATG169010.10123268357176411No Hit
GAGTGTCAGCCGCCGCGGTAATACGGAGGGTGCGAGCGTTGTTCGGAATT167740.10047198593176566No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)