FastQCFastQC Report
Wed 19 Feb 2025
000000000-LPC4P_l01.1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LPC4P_l01.1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7460464
Sequences flagged as poor quality0
Sequence length76
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTAAGTCCGTTCCTGAGCAAGCGATCATTAACGATATCACGCCCCAGTA2008112.6916690436412534No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCGATCGCGCATTTAATGCTTCAGTA1785652.39348383693025No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTGATTGAGGATTTGAAGCAAGAGTA1780512.3865941850265613No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTATATTTCAAATTAGCCGCTGTAGTA1211561.6239740584499835No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCCCATGTGCCATATCATGCTTGAGTA1047671.4042960330617507No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCGATACTTTATACATTGCTTAAGTA873071.170262332208828No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTACATTACCTATATCGCGCATAAGTA756981.014655388726492No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGATCCATCATCGAGTGCTTAAGTA742010.9945896126567998No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTGATGGGGAATTAATAGCTGCAGTA631940.8470518723768387No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTTATAATTTATTCGGTGCTCGAGTA548360.7350213069857318No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTAATTGGTGATCAACGGCCAGAGTA532080.7131996079600411No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGCATCAAATATGTGTGGCATGAGTA518590.6951176227108663No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCGGATGAGACGCTAGACGCGCTAGTA514290.6893539061377416No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGGATGGAACATTAGTAGCTATAGTA503370.6747167468404109No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGAGCTGCAGGCCACTCATTGGAGTA450110.6033270852858482No Hit
AGTAAGTCCGTTCCTGAGCAAGCGATTTGCTCTTAGCCGCCAATACCAGT434400.5822694138058973No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTCGCACGAAGCACTAAATCTGAGTA427060.5724308836554938No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGATAGGCTATGCAGGGCTGTAGTA422590.5664392992178502No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGAGCGGGCTGCGCAAGATTTGAGTA370910.49716746840410997No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGAAGCTGGGGGCATAACATACGAGTA349850.46893866118782956No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGATGCGAAGTGCCCCTCATACGAGTA342770.4594486348302197No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCTATTGAGTATGAAATGCAAAAGTA335940.4502937082733728No Hit
AGTAAGTCCGTTCCTGAGCAAGCGATTGCCAACAGCAGGTCATTGTAGTA332430.44558890707065946No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAAAATGAAGAGCGGACAGCGGGAGTA303290.4065296742937169No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTGGCACTTTGCATGTAATATCAGTA301850.4045994994413217No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCATGCACCTTGCGTACGATGGTAGTA293510.39342057008786585No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTAATCAGTAGCGTTCTGCCAAAGTA290100.38884980880545766No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTTATGTCATGCCAAAAGCAACAGTA278430.3732073501058379No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAAATGATAGGCCAATAGCAGCAGTAC273480.3665723740507293No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGGTGCTAGAGGCAGCGAATACCAGTA268690.360151861868109No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGGAATTCAGGATCTAAGGCATCAGTA263780.3535705017811225No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCTATTAGTTATAATAAGCTTTAGTA252150.3379816590496248No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGGAATACGTAATCTAACGCACGAGTA247210.3313600869865467No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTGATGGCGGATAATGGGCAGAAGTA230470.30892180432745203No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGGCGTTAAGCCTTCGATGAAAGTAC226420.3034931875550904No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTGGCATGTGGCATCACATGCAAGTA224750.30125472088599314No Hit
AGTAAGTCCGTTCCTGAGCAAGCGACCGCATTCAGCGGGCCTTCAAGTAC224150.3004504813641618No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGGCATGATGAATGCCGTGCATGAGTA223320.2993379500256284No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCCAGCAGAGAGCTAGCCATGCTAGTA215340.2886415643852715No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGATATCATTTATATCTCGCCATAGTA197320.26448757074626994No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTTATGAACTATTCATTGCTCGAGTA193330.25913937792609143No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGTATGGGCAGCACGGTGCAATAGTA192840.2584825823165958No Hit
AGTAAGTCCGTTCCTGAGCAAGCGATTGCGTATCGCGAACTATATCAGTA191430.25659261944029216No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTGATTATCTGCGTGATGCACTAGTA185970.2492740397916269No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCGAGCGTGATGCATGTCATGCCAGTA182660.24483731842952394No Hit
AGTAAGTCCGTTCCTGAGCAAGCGACAGCCCCCGGCATTAGATCAAAGTA179500.24060165694787883No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGAATCCGCTGCTGGTAGCTTCAGTA176350.23637939945826428No Hit
AGTAAGTCCGTTCCTGAGCAAGCGATCGCGATAGGCAGCGAATGCCAGTA174520.23392646891667862No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGTATAAAGTATCGGCTGCGCAAGTA174220.23352434915576295No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCGATGGAATGCGGTGAGCTAGAGTA172450.23115184256636048No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTTGCTTTTTGCATGTTATCCCAGTA170170.22809573238340136No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTGGCCAAACGCAGTGAATGTAAGTA165190.22142054435220115No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGAAGCTATCAGCTGCCCATGTTAGTA164200.22009354914117943No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCAGCCCCGAGCAGCAAATCAGAGTA162710.2180963543286316No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGCATGTAGCGAAGAATGTAAGTAC154360.20690402098314528No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGCATAGTAAATCATGTGCAGAAGTA150410.2016094441310889No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGGGCAGCTAGCTTGGCATCGCAGTA144150.1932185451199818No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGGTATCTCTGATGCTGGGCCTGAGTA144060.1930979091917071No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTCATCACTGGCGATGAGCATCAGTA143870.1928432333431272No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTGATCCATGGCGTAAAGCCTTAGTA138560.18572571357491974No Hit
AGTAAGTCCGTTCCTGAGCAAGCGATGATCATACGCCAGGCGCGGGAGTA133230.17858138582265123No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCAGATAACCAATGAGCAGCTTTAGTA127540.17095451435728395No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGGCGCATCTTGCTTGGTATGGGAGTA122710.1644803862065416No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTGATCTATCGCGGAACGCTAGAGTA119730.16048599658144588No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGATCTGGAATACTCGGCAAAAGTA118420.15873007362544744No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTATGCAACCTGCGCGGAATCAAAGTA118160.15838156983265383No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGAAGCAGGGCGCAACTCATAATAGTA114080.15291274108420067No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTAATTGCCCGCGTGCTGCCAGAGTA112860.1512774540564769No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCGAGCTGCGTGCTGTCGATAAGAGTA111790.149843226909211No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGGCGGTTCGCTTGTTATTTGAGTA110580.14822134387351776No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGTGCTAATGGCGGTAAATTCAAGTA107860.1445754580412157No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAATGCATGTGGCTGCCTATCTTAGTA106930.14332888678237707No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGGCCCCCAGCCCGTAATCCTAGTA104390.13992427280662437No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGCATTATGAGCTTTCCGCGTGAGTA103430.1386374895716942No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAATATACTTGGCAAATAGCTCAAGTA103270.13842302569920584No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCGGATTGACAGCGCGAGGCTACAGTA99640.1335573765921262No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGAGATGAAGAGCGACCTGCAGCAGTA99090.13282015703044744No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTAGATGAATTGCCTCCGGCATCAGTA96630.1295227749909389No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTAGCCAGTTGCGAGTTATACCAGTA96240.1290000193017485No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCAAATACCTAGCAATAAGCGGGAGTA94080.12610475702315566No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCAAGCAGTCGGCCTCAGATCGAAGTA92700.12425500612294356No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTGGCCCCCGGCGGGATATCCGAGTA91840.12310226280831862No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAACGCCTACTGCTCATAATGTCAGTA87630.11745918216346865No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCAGCCTGATGCAGTTGATGCGAGTA87520.1173117382511329No Hit
AGTAAGTCCGTTCCTGAGCAAGCGACTGCCACGTGCGGAAGATTGCAGTA87330.11705706240255297No Hit
AGTAAGTCCGTTCCTGAGCAAGCGCTGCTAATAGCCCTGTATTAGAGTAC86140.11546198735092081No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAGGGCTACTTGCCAGGGATGTCAGTA86130.11544858335889027No Hit
AGTAAGTCCGTTCCTGAGCAAGCGAACGCACTGGGCTTTAGATAGGAGTA85220.11422882008411274No Hit
AGTAAGTCCGTTCCTGAGCAAGCGACTTGGCCCGCATACAGCCTGAGTAC83540.11197694942298496No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGTAATCTGGTGCGACGAGCCAAAGTA82660.11079739812429898No Hit
AGTAAGTCCGTTCCTGAGCAAGCGATGGCGTTTAGCCTTGTATTGTAGTA79780.10693704841950849No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTGTGCTCAATGCCTCGCATAAGAGTA79680.10680300849920327No Hit
AGTAAGTCCGTTCCTGAGCAAGCGGCAATATTCTGCACTCCGCATGAGTA79280.10626684881798237No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTTAGCTTCCAGCGCATTATAGTAGTA77090.10333137456329793No Hit
AGTAAGTCCGTTCCTGAGCAAGCGTATATGCATGGCGAGTGGCACTAGTA75810.10161566358339105No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)