FastQCFastQC Report
Mon 23 Sep 2024
000000000-LNMRD_l01.4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LNMRD_l01.4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5873732
Sequences flagged as poor quality0
Sequence length301
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT203560.34655990433339484No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT178250.3034697531313993No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT166920.28418048354947073No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT158080.26913042678828386No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT153930.2620650720870479No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT152200.2591197555489423No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT147140.25050513029876065No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT146020.24859833577698132No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT142560.24270770270077013No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT132140.22496770366778737No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT131640.22411645611342157No Hit
ACGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT126670.21565505542302577No Hit
ACGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT124010.21112641843379984No Hit
ACGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT121900.20753415375437625No Hit
ACGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT118380.2015413709716412No Hit
ACGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT115000.19578693750412854No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT111130.18919828143333745No Hit
ACGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT109540.18649131421045428No Hit
ACGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT108110.18405674620496815No Hit
ACGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT104940.17865983671028915No Hit
ACGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT101160.17222440519928386No Hit
ACGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT98600.16786601772093107No Hit
ACGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT97910.16669129609590633No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT97040.16521012535130988No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT92890.1581447706500739No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT88600.15084106663361557No Hit
ACGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT87790.149462045595543No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT85090.14486530880196782No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT83660.1424307407964817No Hit
ACGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT82480.14042179656817846No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT81920.1394683993072888No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT81330.1384639271931372No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT81210.13825962778008938No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT78380.1334415666223791No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT74670.12712530976898503No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT72820.12397569381783166No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT71940.1224774981221479No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT70750.12045152894275735No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT70320.11971945604600277No Hit
ACGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT68870.11725083813834203No Hit
ACGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT67880.11556536798069779No Hit
ACGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT67190.11439064635567302No Hit
ACGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT65740.11192202844801226No Hit
ACGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT65440.11141127991539279No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT64830.11037275789906656No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT63830.10867026279033501No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT62750.10683156807290493No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT62400.10623569478484889No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT62010.10557172169244357No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT61740.10511204801308606No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)