FastQCFastQC Report
Fri 8 Nov 2024
000000000-LMT66_l01_n02_112.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LMT66_l01_n02_112.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1665
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAAATATCCGAAAGTGTTAACTTCTGCGTCATGGAAGCGATAAAACTCTG30.18018018018018017No Hit
TGCATTCAGATGGATACATCTGTCAACGCCGCTAATCAGGTTGTTTCTGT30.18018018018018017No Hit
GCAAGCCTCAACGCAGCGACGAGCACGAGAGCGGTCAGTAGCAATCCAAA30.18018018018018017No Hit
ATTCATCCATTAACTTCTCAGTAACAGATACAAACTCATCACGAACGTCA20.12012012012012012No Hit
AAGGAAAGGATACTCGTGATTATCTTGCTGCTGCATTTCCTGAGCTTAAT20.12012012012012012No Hit
CAAGTCCAACCAAATCAAGCAACTTATCAGAAACGGCAGAAGTGCCAGCC20.12012012012012012No Hit
TCGTATTCTGGCGTGAAGTCGCCGACTGAATGCCAGCAATCTCTTTTTGA20.12012012012012012No Hit
TTTTCCGCCAGCAGTCCACTTCGATTTAATTCGTAAACAAGCAGTAGTAA20.12012012012012012No Hit
AAAGGTCTAGGAGCTAAAGAATGGAACAACTCACTAAAAACCAAGCTGTC20.12012012012012012No Hit
GTTATAACCTCACACTCAATCTTTTATCACGAAGTCATGATTGAATCGCG20.12012012012012012No Hit
GGTTCCGACTACCCTCCCGACTGCCTATGATGTTTATCCTTTGGATGGTC20.12012012012012012No Hit
AACACGACCAGAAAACTGGCCTAACGACGTTTGGTCAGTTCCATCAACAT20.12012012012012012No Hit
GCGTCGTAACCCAGCTTGGTAAGTTGGATTAAGCACTCCGTGGACAGATT20.12012012012012012No Hit
CTTTTCTTGGCACGATTAACCCTGATACCAATAAAATCCCTAAGCATTTG20.12012012012012012No Hit
CGTCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAATCTT20.12012012012012012No Hit
AACTCAACAGGAGCAGGAAAGCGAGGGTATCCTACAAAGTCCAGCGTACC20.12012012012012012No Hit
CCTACAAAGTCCAGCGTACCATAAACGCAAGCCTCAACGCAGCGACGAGC20.12012012012012012No Hit
GGAAAATGAGAAAATTCGACCTATCCTTGCGCAGCTCGAGAAGCTCTTAC20.12012012012012012No Hit
CAGGTATATGCACAAAATGAGATGCTTGCTTATCAACAGAAGGAGTCTAC20.12012012012012012No Hit
TACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCA20.12012012012012012No Hit
TTAGTGGTTGAACAGCATCGGACTCAGATAGTAATCCACGCTCTTTTAAA20.12012012012012012No Hit
TTCTTGCAAATCACCAGAAGGCGGTTCCTGAATGAATGGGAAGCCTTCAA20.12012012012012012No Hit
GGCCCCTTACTTGAGGATAAATTATGTCTAATATTCAAACTGGCGCCGAG20.12012012012012012No Hit
TTCCATAAGCAGATGGATAACCGCATCAAGCTCTTGGAAGAGATTCTGTC20.12012012012012012No Hit
CCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTA20.12012012012012012No Hit
GTGATTACTTCATGCAGCGTTACCATGATGTTATTTCTTCATTTGGAGGT20.12012012012012012No Hit
AATGCTTGGGAGCGTGCTGGTGCTGATGCTTCCTCTGCTGGTATGGTTGA20.12012012012012012No Hit
AACGCGAGCAGTAGACTCCTTCTGTTGATAAGCAAGCATCTCATTTTGTG20.12012012012012012No Hit
GTTCTGGTGATTCGTCTAAGAAGTTTAAGATTGCTGAGGGTCAGTGGTAT20.12012012012012012No Hit
GTTTCAGGGTTATTTGAATATCTATAACAACTATTTTAAAGCGCCGTGGA20.12012012012012012No Hit
ACGAGCATCATCTTGATTAAGCTCATTAGGGTTAGCCTCGGTACGGTCAG20.12012012012012012No Hit
TCTTGGGAAGTAGCGACAGCTTGGTTTTTAGTGAGTTGTTCCATTCTTTA20.12012012012012012No Hit
CAGTAACTTGACTCATGATTTCTTACCTATTAGTGGTTGAACAGCATCGG20.12012012012012012No Hit
ACCATTATCGAACTCAACGCCCTGCATACGAAAAGACAGAATCTCTTCCA20.12012012012012012No Hit
ACGTTCGTGATGAGTTTGTATCTGTTACTGAGAAGTTAATGGATGAATTG20.12012012012012012No Hit
TGAGGGGTTGACCAAGCGAAGCGCGGTAGGTTTTCTGCTTAGGAGTTTAA20.12012012012012012No Hit
TGAACATAATAAGCAATGACGGCAGCAATAAACTCAACAGGAGCAGGAAA20.12012012012012012No Hit
CTTGTGGCATTTCTACTCTTTCTCAATCCCCAATGCTTGGCTTCCATAAG20.12012012012012012No Hit
TTGAATGCCACCGGAGGCGGCTTTTTGACCGCCTCCAAACAATTTAGACA20.12012012012012012No Hit
TGGAACAACTCACTAAAAACCAAGCTGTCGCTACTTCCCAAGAAGCTGTT20.12012012012012012No Hit
TATCCAACCTGCAGAGTTTTATCGCTTCCATGACGCAGAAGTTAACACTT20.12012012012012012No Hit
TTTAGCGTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCGGAAAACGAA20.12012012012012012No Hit
CCTATGATGTTTATCCTTTGGATGGTCGCCATGATGGTGGTTATTATACC20.12012012012012012No Hit
GGCGCCGAGCGTATGCCGCATGACCTTTCCCATCTTGGCTTCCTTGCTGG20.12012012012012012No Hit
GCGCCTTCGTATGTTTCTCCTGCTTATCACCTTCTTGAAGGCTTCCCATT20.12012012012012012No Hit
ACCAAATCAAAGAAATGACTCGCAAGGTTAGTGCTGAGGTTGACTTAGTT20.12012012012012012No Hit
GCTTGGCACGTTCGTCAAGGACTGGTTTAGATATGAGTCACATTTTGTTC20.12012012012012012No Hit
GTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGTGTTAATGCCAC20.12012012012012012No Hit
GAGATTGCTGGCATTCAGTCGGCGACTTCACGCCAGAATACGAAAGACCA20.12012012012012012No Hit
GCCAGTTTGAATATTAGACATAATTTATCCTCAAGTAAGGGGCCGAAGCC20.12012012012012012No Hit
GTCGCGTCGTAACCCAGCTTGGTAAGTTGGATTAAGCACTCCGTGGACAG20.12012012012012012No Hit
GAAGTTTAAGATTGCTGAGGGTCAGTGGTATCGTTATGCGCCTTCGTATG20.12012012012012012No Hit
GCAACGTACCTTCAAGAAGTCCTTTACCAGCTTTAGCCATAGCACCAGAA20.12012012012012012No Hit
ATATCACCATTATCGAACTCAACGCCCTGCATACGAAAAGACAGAATCTC20.12012012012012012No Hit
AGAACGAACCATAAAAAAGCCTCCAAGATTTGGAGGCATGAAAACATACA20.12012012012012012No Hit
GTTATGGTTTCCGTTGCTGCCATCTCAAAAACATTTGGACTGCTCCGCTT20.12012012012012012No Hit
TCAGATAGTAATCCACGCTCTTTTAAAATGTCAACAAGAGAATCTCTACC20.12012012012012012No Hit
GTTATAACGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGTTG20.12012012012012012No Hit
TTGCTGGTCAGATTGGTCGTCTTATTACCATTTCAACTACTCCGGTTATC20.12012012012012012No Hit
GCTTTCTCGCCAAATGACGACTTCTACCACATCTATTGACATTATGGGTC20.12012012012012012No Hit
AGTCCGTTCAGTTGTTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACC20.12012012012012012No Hit
GACGGTTAATGCTGGTAATGGTGGTTTTCTTCATTGCATTCAGATGGATA20.12012012012012012No Hit
CATCCTTCATAGAAATTTCACGCGGCGGCAAGTTGCCATACAAAACAGGG20.12012012012012012No Hit
ACCGAGGCTAACCCTAATGAGCTTAATCAAGATGATGCTCGTTATGGTTT20.12012012012012012No Hit
TATCCTTAAGAGGGCGTTCAGCAGCCAGCTTGCGGCAAAACTGCGTAACC20.12012012012012012No Hit
TTTCTAATGTCGTCACTGATGCTGCTTCTGGTGTGGTTGATATTTTTCAT20.12012012012012012No Hit
TAAGGCCACGTATTTTGCAAGCTATTTAACTGGCGGCGATTGCGTACCCG20.12012012012012012No Hit
AAACGTACGGATTGTTCAGTAACTTGACTCATGATTTCTTACCTATTAGT20.12012012012012012No Hit
ACGGCAGAAGCCTGAATGAGCTTAATAGAGGCCAAAGCGGTCTGGAAACG20.12012012012012012No Hit
TCAAAATATAACGTTGACGATGTAGCTTTAGGTGTCTGTAAAACAGGTGC20.12012012012012012No Hit
TTAGCCATAGCACCAGAAACAAAACTAGGGACGGCCTCATCAGGGTTAGG20.12012012012012012No Hit
CTTTGCGTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAG20.12012012012012012No Hit
TAATAAGAACGAACCATAAAAAAGCCTCCAAGATTTGGAGGCATGAAAAC20.12012012012012012No Hit
TCTACAGTAGAGTCAATAGCAAGGCCACGACGCAATGGAGAAAGACGGAG20.12012012012012012No Hit
CACGCTCTTTTAAAATGTCAACAAGAGAATCTCTACCATGAACAAAATGT20.12012012012012012No Hit
CAACTGGACAATCAGAAAGAGATTGCCGAGATGCAAAATGAGACTCAAAA20.12012012012012012No Hit
CACGAAGTCATGATTGAATCGCGAGTGGTCGGCAGATTGCGATAAACGGT20.12012012012012012No Hit
TACTGCTCGCGTTGCGTCTATTATGGAAAACACCAATCTTTCCAAGCAAC20.12012012012012012No Hit
GTTTTACAGACACCTAAAGCTACATCGTCAACGTTATATTTTGATAGTTT20.12012012012012012No Hit
AGGCTTTTTTATGGTTCGTTCTTATTACCCTTCTGAATGTCACGCTGATT20.12012012012012012No Hit
GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGG20.12012012012012012No Hit
TGGTACAGCTAATGGCCGTCTTCATTTCCATGCGGTGCACTTTATGCGGA20.12012012012012012No Hit
GGCAGACTTGCCACCAAGTCCAACCAAATCAAGCAACTTATCAGAAACGG20.12012012012012012No Hit
TAACCGTCAGGATTGACACCCTCCCAATTGTATGTTTTCATGCCTCCAAA20.12012012012012012No Hit
GTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCTGCCGA20.12012012012012012No Hit
CAGCAGTCCACTTCGATTTAATTCGTAAACAAGCAGTAGTAATTCCTGCT20.12012012012012012No Hit
TCATTGCTTATTATGTTCATCCCGTCAACATTCAAACGGCCTGTCTCATC20.12012012012012012No Hit
TGCTGAACGCCCTCTTAAGGATATTCGCGATGAGTATAATTACCCCAAAA20.12012012012012012No Hit
GGCCAGTTTTCTGGTCGTGTTCAACAGACCTATAAACATTCTGTGCCGCG20.12012012012012012No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)