Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 000000000-LJMMB_l01_n01_BS_CR_51 000000000-LJMMB_l01_n01_BS_CR_51.fastq.gz Conventional base calls Sanger / Illumina 1.9 4871774.0 0.0 51.0 43.0 78.47089996162858 51.0 pass pass pass pass pass pass pass pass pass warn pass 000000000-LJMMB_l01_n01_BS_CR_52 000000000-LJMMB_l01_n01_BS_CR_52.fastq.gz Conventional base calls Sanger / Illumina 1.9 4783633.0 0.0 51.0 47.0 88.8876519240781 51.0 pass pass pass pass warn warn pass pass pass fail pass 000000000-LJMMB_l01_n01_BS_CR_53 000000000-LJMMB_l01_n01_BS_CR_53.fastq.gz Conventional base calls Sanger / Illumina 1.9 5532438.0 0.0 51.0 44.0 80.24672716557444 51.0 pass pass pass pass warn fail pass pass pass fail pass 000000000-LJMMB_l01_n01_BS_CR_54 000000000-LJMMB_l01_n01_BS_CR_54.fastq.gz Conventional base calls Sanger / Illumina 1.9 4950908.0 0.0 51.0 43.0 74.86222586466202 51.0 pass pass pass pass pass pass pass pass pass warn pass 000000000-LJMMB_l01_n01_BS_CR_55 000000000-LJMMB_l01_n01_BS_CR_55.fastq.gz Conventional base calls Sanger / Illumina 1.9 4828866.0 0.0 51.0 44.0 72.5307197863493 51.0 pass pass pass pass pass pass pass pass pass fail pass 000000000-LJMMB_l01_n01_undetermined 000000000-LJMMB_l01_n01_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 523608.0 0.0 51.0 44.0 47.96389877074703 51.0 pass pass pass pass pass warn pass pass fail warn pass 000000000-LJMMB_l01_n02_BS_CR_51 000000000-LJMMB_l01_n02_BS_CR_51.fastq.gz Conventional base calls Sanger / Illumina 1.9 4871774.0 0.0 51.0 43.0 79.34520464620238 51.0 pass pass pass pass pass pass pass pass pass warn pass 000000000-LJMMB_l01_n02_BS_CR_52 000000000-LJMMB_l01_n02_BS_CR_52.fastq.gz Conventional base calls Sanger / Illumina 1.9 4783633.0 0.0 51.0 47.0 89.698765322802 51.0 pass pass pass pass warn pass pass pass pass warn pass 000000000-LJMMB_l01_n02_BS_CR_53 000000000-LJMMB_l01_n02_BS_CR_53.fastq.gz Conventional base calls Sanger / Illumina 1.9 5532438.0 0.0 51.0 44.0 81.35405760077867 51.0 pass pass pass pass warn pass pass pass pass warn pass 000000000-LJMMB_l01_n02_BS_CR_54 000000000-LJMMB_l01_n02_BS_CR_54.fastq.gz Conventional base calls Sanger / Illumina 1.9 4950908.0 0.0 51.0 43.0 75.7292573473983 51.0 pass pass pass pass pass pass pass pass pass warn pass 000000000-LJMMB_l01_n02_BS_CR_55 000000000-LJMMB_l01_n02_BS_CR_55.fastq.gz Conventional base calls Sanger / Illumina 1.9 4828866.0 0.0 51.0 44.0 73.84413433318488 51.0 pass pass pass pass pass pass pass pass pass warn pass 000000000-LJMMB_l01_n02_undetermined 000000000-LJMMB_l01_n02_undetermined.fastq.gz Conventional base calls Sanger / Illumina 1.9 523608.0 0.0 51.0 44.0 51.922309509685526 51.0 pass pass pass pass pass warn pass pass warn warn pass