FastQCFastQC Report
Tue 22 Oct 2024
000000000-LJM9J_l01.4.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LJM9J_l01.4.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2604632
Sequences flagged as poor quality0
Sequence length237
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT161460.6198956320892932No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT151640.5821935689955433No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT138670.5323976669256923No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT132820.5099376802557904No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT132770.5097457145577572No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT129230.4961545431369959No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT121210.46536324517244665No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT116540.4474336489761317No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT114310.4388719788438443No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT110090.4226700739298296No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT109690.4211343483455628No Hit
ACGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT103400.39698506353296736No Hit
ACGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT103350.39679309783493405No Hit
ACGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT96280.3696491481330184No Hit
ACGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT95940.3683437813863916No Hit
ACGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT94120.36135622997797767No Hit
ACGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT89870.345039145645143No Hit
ACGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT89360.3430810955252028No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT88450.3395873198209958No Hit
ACGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT85060.3265720454943347No Hit
ACGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT79560.30545581871066624No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT79480.30514867359381287No Hit
ACGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT78290.30057988998061913No Hit
ACGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT75820.29109678449777165No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT72550.27854222784639054No Hit
ACGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT71600.2748948795837569No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT69910.2684064389902297No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT69240.26583409863658286No Hit
ACGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGCCT66170.2540474047773351No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT66060.2536250802416618No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT65230.25043844965430817No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT63440.24356607766471425No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT62900.24149284812595406No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT62160.23865175579506048No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT59710.22924543659142635No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT59200.22728738647148616No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT58640.22513737065351264No Hit
ACGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT55710.21388818074875837No Hit
ACGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT54040.20747652643444447No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT53800.20655509108388442No Hit
ACGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT52720.20240863200636405No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT52380.20110326525973726No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT51740.19864610432491042No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT51370.19722555815946363No Hit
ACGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT51160.19641930222772355No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT50810.19507554234149008No Hit
ACGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT49800.19119783524121642No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT48520.18628351337156265No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT47960.18413349755358915No Hit
ACGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT46930.18017900417410215No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT46810.1797182864988221No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT46790.17964150021960876No Hit
ACGGACTACGGGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT46630.17902720998590205No Hit
ACGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT46000.17660844219068184No Hit
ACGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT44610.1712717957853547No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT44180.1696208907822679No Hit
ACGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT43940.1686994554317078No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT43500.16701015728901433No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT43440.16677979845137433No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT42200.16201904914014725No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT41740.16025296471824044No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT41340.15871723913397362No Hit
ACGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT41170.15806455576066025No Hit
ACGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT40930.15714312041010015No Hit
ACGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT40880.1569511547120668No Hit
ACGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT40600.15587614680308007No Hit
ACGGACTACTGGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT39990.15353416528707317No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT39700.15242076423847975No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT38820.1490421679530928No Hit
ACGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT38330.14716090411236596No Hit
ACGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT38150.1464698275994459No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT38060.14612428934298588No Hit
ACGGACTACGCGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT37750.14493410201517912No Hit
ACGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT37540.14412784608343904No Hit
ACGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT37320.1432831970120923No Hit
ACGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT36940.14182425770703885No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT36890.14163229200900548No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT36010.13825369572361854No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT35620.1367563632789584No Hit
ACGGACTACGAGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT35310.13556617595115164No Hit
ACGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT35180.13506706513626493No Hit
ACGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT35070.13464474060059156No Hit
ACGGACTACTCGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT34980.13429920234413154No Hit
ACGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCACCT34840.13376169838963814No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT34660.1330706218767181No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT34510.13249472478261806No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT34460.1323027590845847No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT34250.13149650315284464No Hit
ACGGACTACTGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT33500.12861701768234438No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT33460.1284634451239177No Hit
ACGGACTACTAGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT33280.12777236861099764No Hit
ACGGACTACGGGGGTATCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT33020.12677414698122422No Hit
ACGGACTACAGGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT32770.12581431849105748No Hit
ACGGACTACTGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT32700.12554556651381077No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT32590.1251232419781374No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT32190.12358751639387061No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT32060.12308840557898391No Hit
ACGGACTACCGGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT32010.12289643988095056No Hit
ACGGACTACACGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT31580.12124553487786374No Hit
ACGGACTACCGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT31150.11959462987477694No Hit
ACGGACTACGCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT30720.11794372487169012No Hit
ACGGACTACGGGGGTATCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT30670.11775175917365678No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT30490.11706068266073673No Hit
ACGGACTACAAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT30460.1169455032419167No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT30350.11652317870624333No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT30290.11629281986860332No Hit
ACGGACTACCAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT30070.11544817079725657No Hit
ACGGACTACCAGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT29980.11510263254079654No Hit
ACGGACTACGCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT29820.11448834230708983No Hit
ACGGACTACGGGGGTTTCTAATCCCGTTTGCTCCCCTAGCTTTCGCGCCT29650.11383565893377645No Hit
ACGGACTACGAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT29610.11368208637534975No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT29590.11360530009613641No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT29540.11341333439810308No Hit
ACGGACTACAAGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT29050.11153207055737624No Hit
ACGGACTACACGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT28960.11118653230091623No Hit
ACGGACTACCCGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT28830.1106874214860295No Hit
ACGGACTACGAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT28740.11034188322956948No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT28550.10961241357704274No Hit
ACGGACTACTGGGGTATCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT28520.10949723415822274No Hit
ACGGACTACGGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT28480.10934366159979604No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT28200.10826865369080929No Hit
ACGGACTACTCGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT28170.10815347427198929No Hit
ACGGACTACACGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT28000.1075007908986759No Hit
ACGGACTACTAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT27920.10719364578182253No Hit
ACGGACTACTCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT27780.10665614182732916No Hit
ACGGACTACTAGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT27610.10600345845401576No Hit
ACGGACTACCAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT27570.1058498858955891No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGAGCCT27380.10512041624306237No Hit
ACGGACTACGGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCTCCT27030.10377665635682891No Hit
ACGGACTACAAGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGTCT26870.10316236612312218No Hit
ACGGACTACCCGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGCGTCT26840.10304718670430218No Hit
ACGGACTACGCGGGTATCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT26750.10270164844784216No Hit
ACGGACTACAGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT26600.10212575135374209No Hit
ACGGACTACAGGGGTATCTAATCCTGTTTGCTCCCCACGCTTTCGTGCCT26510.10178021309728207No Hit
ACGGACTACTGGGGTTTCTAATCCCGTTTGCTCCCCTAGCTTTCGCGCCT26390.10131949542200203No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTTGCTCCCCACGCTTTCGTGCAT26330.101089136584362No Hit
ACGGACTACCCGGGTTTCTAATCCCGTTCGCTCCCCTAGCTTTCGCGTCT26300.100973957165542No Hit
ACGGACTACCGGGGTTTCTAATCCTGTTCGCTCCCCACGCTTTCGCGCCT26240.100743598327902No Hit
ACGGACTACGCGGGTTTCTAATCCCGTTTGCTCCCCTAGCTTTCGCGCCT26160.10043645321104863No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)