FastQCFastQC Report
Sat 9 Nov 2024
000000000-LJ9RB_l01_n02_117.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LJ9RB_l01_n02_117.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2545
Sequences flagged as poor quality0
Sequence length151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCGGAAAACGAACAAGCG40.15717092337917485No Hit
GTGACTATTTTCGTGATATTGGTCGTATGGTTCTTGCTGCCGAGGGTCGC30.11787819253438114No Hit
ATGAGCCTGTCGCATTGCATTCATCAAACGCTGAATAGCAAAGCCTCTAC30.11787819253438114No Hit
TTAGACATAATTTATCCTCAAGTAAGGGGCCGAAGCCCCTGCAATTAAAA30.11787819253438114No Hit
GCACGTAATTTTTGACGCACGTTTTCTTCTGCGTCAGTAAGAACGTCAGT30.11787819253438114No Hit
ATACGCTCAAAGTCAAAATAATCAGCGTGACATTCAGAAGGGTAATAAGA30.11787819253438114No Hit
ACGGGATGAACATAATAAGCAATGACGGCAGCAATAAACTCAACAGGAGC30.11787819253438114No Hit
CAGACTTTTATTTCTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGT30.11787819253438114No Hit
CAAAAAGAGCTTACTAAAATGCAACTGGACAATCAGAAAGAGATTGCCGA30.11787819253438114No Hit
CATACAATTGGGAGGGTGTCAATCCTGACGGTTATTTCCTAGACAAATTA30.11787819253438114No Hit
AAAACATTTGGACTGCTCCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAA30.11787819253438114No Hit
TGGTCAGTATTTTACCAATGACCAAATCAAAGAAATGACTCGCAAGGTTA30.11787819253438114No Hit
GGCGTTGACAGATGTATCCATCTGAATGCAATGAAGAAAACCACCATTAC30.11787819253438114No Hit
CAAAGCACCTTTAGCGTTAAGGTACTGAATCTCTTTAGTCGCAGTAGGCG30.11787819253438114No Hit
TATTAGACATAATTTATCCTCAAGTAAGGGGCCGAAGCCCCTGCAATTAA30.11787819253438114No Hit
GATGTAGCTTTAGGTGTCTGTAAAACAGGTGCCGAAGAAGCTGGAGTAAC30.11787819253438114No Hit
TATTTCTCGCCATAATTCAAACTTTTTTTCTGATAAGCTGGTTCTCACTT30.11787819253438114No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)