FastQCFastQC Report
Thu 13 Mar 2025
000000000-LJ859_l01_n01_RM199.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LJ859_l01_n01_RM199.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTCCGTTGTTTCGCTCTCTTGTTCTCCTTCGCCGTTTTCTTCCTCTCC17.6923076923076925No Hit
CTCTCGTTTCCTTTTTCTTTTTTCGCCCCCTTTTTTCCTTTTTTCTTTTT17.6923076923076925No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCT17.6923076923076925No Hit
CTCGCTGCTTCCCGGTCCTCCGTGGCTTCTCGCCTTCGGGCTTTTTCCCC17.6923076923076925No Hit
TTTTCTTTTTCTTCCTTTTCTTTTTTTTTCTCCTTTTTCTCTCTCTTTCT17.6923076923076925No Hit
TTGGTCCTGTGTGTTTCTTCTCTCGCTTTCTCCTGCTGCCTTCTCTTCTC17.6923076923076925No Hit
CCCCTCTCTTTTTCTTTCTTTTTTTTTTTTTTTCTTTTTCTTTTCTCTTT17.6923076923076925No Hit
TTCCGTTTCCTGTTTCTGTCCCTTCTTTTCCGCTTCCTCTCCTTTCTTCT17.6923076923076925No Hit
CTTTTCTTTCTCTTCTTTCCTTCTCTCTCCCTTCTCTTTTTTCTTTTCCC17.6923076923076925No Hit
TTCTTCTTTTTTCTCTTCTTTTTTTTTTTTTTTTTTTTTTTCTTCTTCTT17.6923076923076925No Hit
GGCGTTATAACCTCACACTCAATCTTTTATCACGAAGTCATTATTGAATC17.6923076923076925No Hit
CTTTTCTTTCTCCTCCTTTCTCCTTTCTTTTCTCTCTCTTTTTTTTTTCC17.6923076923076925No Hit
CCGCTTTTTCCCTTTTTTCTCTTTCCTTTTTTTCCTTTCCCTCTTTTTTT17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)