FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITSDve913.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITSDve913.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences254
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT8734.25196850393701No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT5120.078740157480315No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC2610.236220472440944No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT218.267716535433072No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT124.724409448818897No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT103.937007874015748No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT41.574803149606299No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT41.574803149606299No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT31.1811023622047243No Hit
CGGCTGCGTTCTTCATCGATGCGTGTTACTTCCTCTAAATGACCAAGCCC20.7874015748031495No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTAAAAGT10.39370078740157477No Hit
TCACTTGCGGTTGACCTTCAATGTTGTATGCTCAGCAACAGCGGCAGCAG10.39370078740157477No Hit
ACGCCATGAAGACCTCCGGACACCTTGTAGGAATTCTGGTCGAATTTACC10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGGAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
TCACTTGCGGCTGGACTGGGAGACGTTGTTTACCCGCTCGGCTGATGGTG10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGATACTTCCTCTAAATGACCAAGCCC10.39370078740157477No Hit
CGGCTGCGTTCTTCATAGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGCTGTTGAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATACGTTGTTAAAAGT10.39370078740157477No Hit
CGGCGGCGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCAGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCATTGTTGAAAGT10.39370078740157477No Hit
CGGCTGCGTCTTCATCGCTGCGAGAGCCAAGAGATCCGTTGTTAAAAGTT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGTGAGCCAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCAAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
TCACTTGCGGCTCGACTGGGAGACGTTGTTTACCCGCTCGGCTGATGGTG10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTTAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCAAGTTACTTCCTCTAAATGACCAAGCCC10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGATGCGTTCTTCATCGATGCGAGAGCCATGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTGGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGTT10.39370078740157477No Hit
TCACTTGCGGTTCAACCGGGAGACGTTGTTTACCCGCTCGGCTGATGGTG10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATTCATTGTTGAAAGT10.39370078740157477No Hit
GGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.39370078740157477No Hit
CGGCTACGTTCTTCATCGATGCGAGTTACTTCCTCTAAATGACCAAGCCC10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGT10.39370078740157477No Hit
CGGCTGCGTTCTTCATCGGTGCGAGAGCCAAGAGATCTGTTGTTAAAAGT10.39370078740157477No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)