FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITSDve886.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITSDve886.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53
Sequences flagged as poor quality0
Sequence length301
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT3362.264150943396224No Hit
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC23.7735849056603774No Hit
TCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC23.7735849056603774No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGCTGTTGAAAGT11.8867924528301887No Hit
TCACTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.8867924528301887No Hit
ACACCATGGAAGCCACCGGAGACCTTGTACGCGTTATCGTCCGAGGTGTT11.8867924528301887No Hit
ACACCGTGGAGGCCGCCTGAGACCTTATAGGCATTGTCGTCGCTGGTGTT11.8867924528301887No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT11.8867924528301887No Hit
TCACTTGCGGCTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.8867924528301887No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAGGT11.8867924528301887No Hit
TCACTTGCGGTTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.8867924528301887No Hit
ACGCCATGAAGACCTCCCGACACCTTGTAGGCATTGTCGTCGGACGTATT11.8867924528301887No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT11.8867924528301887No Hit
TCACTTGCGGTTCAACTGAGCAAATTCACGCGCCGCCACGACATTCCCAC11.8867924528301887No Hit
TCACTTGCGGTTGGACTGAGCAAGTTCGTGCGCCGTCACGACATTCCCAT11.8867924528301887No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT11.8867924528301887No Hit
TCACTTGCGGCTCAACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.8867924528301887No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT11.8867924528301887No Hit
ACGCCGTGTAGTCCTCCGGACACCTTGTACGCATTGTCGTCCGACGTGTT11.8867924528301887No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)