FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITSDve883.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITSDve883.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9
Sequences flagged as poor quality0
Sequence length301
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTGCGGTTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC111.11111111111111No Hit
TCACTTGCGGCTGAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC111.11111111111111No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT111.11111111111111No Hit
ACTCCGTGCAATCCGCCCGAAACCTTGTAGGAATTCCAGCCGAATTTGCC111.11111111111111No Hit
ACTCCGTGCAGGCCGCCTGACACCTTGTAGGCATTGTCCTCGTTCGTGTT111.11111111111111No Hit
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC111.11111111111111No Hit
ACCCCGTGTAGGCCGCCCGAGACCTTATACGCGTTGTCATCACTGGTGTT111.11111111111111No Hit
ACTCCATGGAAGCCACCTGAGACCTGGTAGGCCTTGCCCTCGAACTTGCC111.11111111111111No Hit
TCACTTGCGGTTCGACCGAGCAAATTCACGCGCCGCCACGACATTCCCAC111.11111111111111No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)