FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITSDve511.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITSDve511.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11131
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT373533.554936663372565No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT364032.70146437876202No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT4443.9888599407061363No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT3813.4228730572275627No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT3433.0814841433833435No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT3142.8209504986074925No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT2792.5065133411193963No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT1751.5721857874404814No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT320.2874854011319738No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAAATCCGTTGCTGAAAGT270.24256580720510285No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGGGATCCGTTGTTGAAAGT250.22459796963435452No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGGGATCCGTTGTTGAAAGT190.17069445692210944No Hit
CGGCTGCGTTATTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT190.17069445692210944No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACAAAGAGATCCGTTGTTGAAAGT190.17069445692210944No Hit
CGGCTGCGTTATTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT180.16171053813673525No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCAAAAGT170.15272661935136106No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATACGTTGTTGAAAGT160.1437427005659869No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGC160.1437427005659869No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGCTGTTGAAAGT160.1437427005659869No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT150.1347587817806127No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTCGAAAGT150.1347587817806127No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCTAGAGATCCATTGTTATAAGT150.1347587817806127No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGACCCGTTGTTGAAAGT150.1347587817806127No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATACGTTGTTGAAAGT140.12577486299523855No Hit
CGGCTGCGTTCTTCATCGATGCGGGAACCAAGAGATCCGTTGTTGAAAGT140.12577486299523855No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGGTCCGTTGTTGAAAGT140.12577486299523855No Hit
CGGCTGCGTTCTTAATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT140.12577486299523855No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAGAGT140.12577486299523855No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCAGTTGTTGAAAGT130.11679094420986434No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGT130.11679094420986434No Hit
CGGCTGCGTTCTTCATCGATGCGAGGACCAAGAGATCCGTTGTTGAAAGT130.11679094420986434No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAGGAGATCCGTTGTTGAAAGT130.11679094420986434No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAGGT130.11679094420986434No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGGTCCGTTGTTGAAAGT130.11679094420986434No Hit
CGGCTGCGTTCTTCATAGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT120.10780702542449017No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGGAAGT120.10780702542449017No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCAGTTGTTGAAAGT120.10780702542449017No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)