FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITSChi435.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITSChi435.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10016
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT533053.21485623003195No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT9379.35503194888179No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT7567.5479233226837055No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT3993.983626198083067No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT2352.346246006389776No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT2292.2863418530351436No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT1741.737220447284345No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT960.9584664536741214No Hit
CGGCTGCGTTCTTCATCGATGCCAGTACCAAGAGATCCGTTGTTGAAAGT660.6589456869009584No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTAAAAGT350.3494408945686901No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATCCGTTGTTAAAAGT300.2995207667731629No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCTGAAAGT290.2895367412140575No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAGGAGATCCGTTGTTAAAAGT270.2695686900958466No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGGTCCGTTGTTAAAAGT270.2695686900958466No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTAAAAGT270.2695686900958466No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT270.2695686900958466No Hit
CGGCTGCGTTATTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT260.2595846645367412No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT260.2595846645367412No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTAAAAGT250.24960063897763576No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGACCCGTTGTTAAAAGT240.23961661341853036No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGGGATCCGTTGTTAAAAGT230.22963258785942492No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTAAAAGT220.21964856230031948No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT210.20966453674121405No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAGAAGT200.1996805111821086No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGC190.18969648562300317No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAGGT190.18969648562300317No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT180.17971246006389777No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAGAGT180.17971246006389777No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATACGTTGTTAAAAGT160.1597444089456869No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTAAAAGT160.1597444089456869No Hit
CGGCTGCGTTCTTCATAGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT150.14976038338658146No Hit
CGGCTGCGTTCTTAATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT140.13977635782747602No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCAGTTGTTAAAAGT140.13977635782747602No Hit
CGGCTGCGTTCTTCATCGATGCAAGAGCCAAGAGATCCGTTGTTAAAAGT140.13977635782747602No Hit
CGGCTGTGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT140.13977635782747602No Hit
CGGCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTAAAAGT140.13977635782747602No Hit
CGGCTGCGTTCTTCATCTATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT130.1297923322683706No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCAAAGAGATCCGTTGTTAAAAGT130.1297923322683706No Hit
CGGCTGCGTTCTTTATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT130.1297923322683706No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT120.11980830670926518No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCTGTTGTTAAAAGT120.11980830670926518No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT110.10982428115015974No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCAAAAGT110.10982428115015974No Hit
CGGCTGCGTTCTTCATTGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT110.10982428115015974No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT110.10982428115015974No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)