FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITSChi408.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITSChi408.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT19136.38095238095238No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT5710.857142857142858No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT529.904761904761905No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT326.095238095238095No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT295.523809523809524No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGT193.619047619047619No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGT91.7142857142857144No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCCGAAAGT50.9523809523809524No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCATTGTTGAAAGT40.7619047619047619No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGTTGAAAGT40.7619047619047619No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCACTGTTGAAAGT30.5714285714285714No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTAAAAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT20.38095238095238093No Hit
CGGCTGCGTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAGAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCATTGTTGAAAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATACGTTGTTGAAAGT20.38095238095238093No Hit
CGACTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCGAGAGATCCGTTGTTGAAAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCATTGTTGAAAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGT20.38095238095238093No Hit
CGGCTGCGTTCTTCATCGATGCCATAACCAAGAGATCCGTTGTTGAAAGT20.38095238095238093No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGCCGAAAGT10.19047619047619047No Hit
ACTCCGTGGAGACCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCACAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGATATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATCCCACAGCCAAAAGATCCGTTGTTCAAAGT10.19047619047619047No Hit
CATCTACTTTCTTCTTCTCTTCTCACGTCCTGATCTCCCTTTTCCCACTA10.19047619047619047No Hit
CGGCTGCGTTCTTCTCGCTGCCAGAACCAAGAGATCCGTTGTTGAAAGTT10.19047619047619047No Hit
CCCCCTTCCCTGCGCCCCTCTCCTGAAGTCACTAAACGCTCCGATTTGAT10.19047619047619047No Hit
ACTCCATGGAGTCCACCTGACACCTTGTAGGAGTTCTGGTCGAACTTGCC10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCTATTGTTGAAAGT10.19047619047619047No Hit
CGACTGCGTTATTCATCGATGCCAGAACCCGGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAGAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATTCCATAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGAGCAAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCCATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATCCGCAAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATTCGTTGCCGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACAAAGAGATCCGTTGTTAAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGAGCCAGAACCAAGAGATCCGTTGTTGAAAGTT10.19047619047619047No Hit
CGGCTGCGCTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATAGATGCCAGAGCCAAGAGGTCCATTGTTGAAAGT10.19047619047619047No Hit
CGACTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.19047619047619047No Hit
CTGCTGCGTTCTTCATCGCTGCGGGAGCCAATAGCTCCGTGGCTACAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCAGTTGTTAAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGCTGTTAAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCTAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGATAGT10.19047619047619047No Hit
CGGCTGTGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGAGCCAGAGCCAAGAGATCCATTGTTGAAAGTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAGTTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCTATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGAACCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGTGCCAGAGCCAAGAGATCCATTGTTGAAAGTT10.19047619047619047No Hit
ACCCCGTGTAAGCCACCCGACACCTTGTAGGAATTCTGGTCGAACTTACC10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCATGAGATCCGTTGTTGAAAGC10.19047619047619047No Hit
ACGCCATGGAGACCTCCGGATGCCGCGTAGGAACCGGAACCGAACTTGCC10.19047619047619047No Hit
CGGCTGCGTTTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTT10.19047619047619047No Hit
CGGCTGCGTTCTTGATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATCGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTAAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGT10.19047619047619047No Hit
CGCCGAGAGTTCCATTGCCTTCCGTCGTTGTTTAACAGCATTGTAGTTTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAGTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATACGTTGCTGAAAGT10.19047619047619047No Hit
TTCGATAAAAATGATTCGCGTATCCAACCTGCAGAGCCTTATCGCTTCCA10.19047619047619047No Hit
CGGCTGCGTTCCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCGAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGTAAGT10.19047619047619047No Hit
CAGCTTCGGTCTTCATCGATGGCAGAACCAAGATATCCGTTGGTTGACGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGT10.19047619047619047No Hit
CGGCCGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATACGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAGGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAACAGT10.19047619047619047No Hit
CAGACGAGCTGTACAGTGCTGTCAGATCCCGTAGCTACGGTCTTGATAGA10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAAAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTAAAAGT10.19047619047619047No Hit
TGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGTTTTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGACAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGAGCGAGAGCCAAGAGATCCGTTGTTGAAAGTT10.19047619047619047No Hit
CGGCTTCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCCTCATCGATGCCAGAACCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCCTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTCGTTAAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGGGCCAAGAGATACGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGCGAGCCAAGAGATCCGTTGTTAAAAGT10.19047619047619047No Hit
CGGCTTCCTTCTTCCTCGATGCCAGAACCAAGATATCCGTTTTTTAAAAT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGGGATCCGCTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCGTCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CAGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCAGAGCCAAGAGATCCGTTGTTAAAAGTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCAAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCTAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGGTCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATTCGTTGTTGAAAGT10.19047619047619047No Hit
CGGTTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CACCTCGCCTCTACCTGCCTTACCTATTTCTCTCTACTGCGCTTCTCCGC10.19047619047619047No Hit
CGGCTGCGTTCTTAATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGACTGCGTTCTTCATAGATGCGAGAACCAAGAGATACGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATAGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
ACACCGTGTAGGCCACCAGACACCTTGTACGCATTGTCGTCCGACGTGTT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCATGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGACGCGAGAGCCAAGAGATCCGTTGCTAAAAGT10.19047619047619047No Hit
CTGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGACCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGCCGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGGAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCCATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCCCGAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit
CGGATGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT10.19047619047619047No Hit
ACAGGAACCACACGGGGTCGAGAGCATGAGGCGGTCATCTGAACCTGCAC10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGT10.19047619047619047No Hit
CGGCTGCGTTCTTCATCGATGCGGGAGCCAAGAGATCCGTTGTTGAAAGT10.19047619047619047No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)